Gene Lcho_0986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0986 
Symbol 
ID6162177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp1053716 
End bp1054183 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content68% 
IMG OID641663736 
ProductMarR family transcriptional regulator 
Protein accessionYP_001790022 
Protein GI171057673 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAA AGAATTCATC CTCCCGCCAC GGACTGGACG AGGGCGTCTT GGGCGAGATC 
GTCGGTTACC AGGTGGTGCG CGCGCAGATC ACCACCCACG CCCTGTTCAT GCGGCACGTC
GGCGATCCGC TCGACCTGCG GCCGGTCGAA TATTCGCTGC TGCTGCTGCT GCAGGCCAAC
GAGCAGGTCA CGCCCAAGCA GCTGGCGCAG ACGCTGGTAC TGACCGCGCC CAAGCTCACC
ATCCTGCTCG ACCGCCTGCA GGAGCGCGGC CTGATCAACC GCGTGCGCAG CGACACCGAC
GGCCGCTCGC AGCACGTGCT GCTGACCGAC GCCGGTGCCG AGCTGGCCCG GCAGGGCAGC
GACACCGCGC GGCTGATCGA GATGAGCCTC GACGACGTGC TCAGCCCCGC CGAGCGCGCG
ATGCTGATGG AGCTGCTGAA GAAGGTGGCC GCCTCGCACC GCGGCTGA
 
Protein sequence
MSKKNSSSRH GLDEGVLGEI VGYQVVRAQI TTHALFMRHV GDPLDLRPVE YSLLLLLQAN 
EQVTPKQLAQ TLVLTAPKLT ILLDRLQERG LINRVRSDTD GRSQHVLLTD AGAELARQGS
DTARLIEMSL DDVLSPAERA MLMELLKKVA ASHRG