Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0986 |
Symbol | |
ID | 6162177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 1053716 |
End bp | 1054183 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641663736 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001790022 |
Protein GI | 171057673 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAAAA AGAATTCATC CTCCCGCCAC GGACTGGACG AGGGCGTCTT GGGCGAGATC GTCGGTTACC AGGTGGTGCG CGCGCAGATC ACCACCCACG CCCTGTTCAT GCGGCACGTC GGCGATCCGC TCGACCTGCG GCCGGTCGAA TATTCGCTGC TGCTGCTGCT GCAGGCCAAC GAGCAGGTCA CGCCCAAGCA GCTGGCGCAG ACGCTGGTAC TGACCGCGCC CAAGCTCACC ATCCTGCTCG ACCGCCTGCA GGAGCGCGGC CTGATCAACC GCGTGCGCAG CGACACCGAC GGCCGCTCGC AGCACGTGCT GCTGACCGAC GCCGGTGCCG AGCTGGCCCG GCAGGGCAGC GACACCGCGC GGCTGATCGA GATGAGCCTC GACGACGTGC TCAGCCCCGC CGAGCGCGCG ATGCTGATGG AGCTGCTGAA GAAGGTGGCC GCCTCGCACC GCGGCTGA
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Protein sequence | MSKKNSSSRH GLDEGVLGEI VGYQVVRAQI TTHALFMRHV GDPLDLRPVE YSLLLLLQAN EQVTPKQLAQ TLVLTAPKLT ILLDRLQERG LINRVRSDTD GRSQHVLLTD AGAELARQGS DTARLIEMSL DDVLSPAERA MLMELLKKVA ASHRG
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