| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0976 |
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| Symbol | |
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| ID | 6163266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1041809 |
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| End bp | 1042756 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663727 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001790013 |
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| Protein GI | 171057664 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAC GTCCTCTGAT CATTCGTCTG CGCAATTGGG TGGGCGACGT GATCCTCGGC
GTACCCGCGC TGCAACTGCT GCAATCCCAC GGATACGCCC CCCAGCTGGT CGGCAAGGGC
TGGGCCAAGG CGCTGCTGGC CGGCCACGGC TGGCCCACCC ACAGCCGCCC GGCCACCTTG
CGCGAGCGTG TGCAGCAGCT GCGCGAGCTG CGCCGCCAGG CCCGGGCGAT CGACAGCGGT
TTCGACCGCC GCGAAAACGC GCTGGTGCTG CCGACCTCGT TCTCCGGCGC GCTCGAGATG
CGGCTGGCCG GCCTGCGGGC GGTCGGTTAT GCGCAGGAGG CGCGCGGCAT CCTGCTTGCG
CGCAGCGAGC CGATCACCTA CGGCGGCCAC GCGCTCACCA GCTACTGGGA ACTGGCCTGC
CGCTTCCTGC ACATCGACGC ACTACCGCCA GCCACGATCG ATCTGAAGAC CCTGCCGGCC
GACCAGCAGC AGGCCGATGC GCTGCTCGCC GGCCACGGCC TGCGCCCCGG CTTCGTCGTG
ATCTGCCCGT TCGCCGGTGG CCAGTTCGAG AAGCAGGACA AGACCTGGCC GGCCTTCCCC
GCGTTCACCC AGGCGCTGCT GCAGCGCGGC CACCAGGTGA TCGCCTGCCC CGGGCCGGAC
GAGGATCGCA TCATCTCCGA GCAGCATCCG GGCGTGAAAC TGCTGCCCGG CGTCAAGCTG
GGTGTCTACG GCGGCCTGCT GCGGCGCGCG GCGCTGGTGG TGTCCAACGA CACCGGGCCG
GCGCACCTGG CCGCCGCCGT CGGCGCGCCG GTGCTGAGCG TGCTCGGGCC GACCAAGCCG
GAGCAATGGG CGCCCTGGGG GCCGACCGTG ACGGTGGTGC GCCGCTGGCC CGACTGGCCG
ACGGTCGACG AAGTGCTCTC CCGCGTCGAC GACCGGCTCG CAGCCTGA
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| Protein sequence | MNSRPLIIRL RNWVGDVILG VPALQLLQSH GYAPQLVGKG WAKALLAGHG WPTHSRPATL
RERVQQLREL RRQARAIDSG FDRRENALVL PTSFSGALEM RLAGLRAVGY AQEARGILLA
RSEPITYGGH ALTSYWELAC RFLHIDALPP ATIDLKTLPA DQQQADALLA GHGLRPGFVV
ICPFAGGQFE KQDKTWPAFP AFTQALLQRG HQVIACPGPD EDRIISEQHP GVKLLPGVKL
GVYGGLLRRA ALVVSNDTGP AHLAAAVGAP VLSVLGPTKP EQWAPWGPTV TVVRRWPDWP
TVDEVLSRVD DRLAA
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