Gene Lcho_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0969 
Symbol 
ID6163033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp1035355 
End bp1036008 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID641663720 
Producthypothetical protein 
Protein accessionYP_001790006 
Protein GI171057657 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CCGTTCTGAC CGCACGCGCG GTGACCGACC TGCACGACAA CCTGCTGGCC 
AATCCAGGTT GGCCCGCGAG CGTCGACCTC ATCCCTGCCG AGCCGCTCTG GCACTGGATC 
GCCACCAACC ACCGCAACAA CTGCCTGCTG TGGGCCGAGG AGGATCTGGC CCGGCGCACC 
ACGGTGAGCG ACGCGGAGAT CGCCAAGAAC AAGCGTGCGA TCGACGGCTA CAACCAGGCG 
CGCAACGACG CCACCGAGCG GGTCGACGAG ATCCTGCTGA TCGCGCTCGG CCTGGTCGAT 
CCGGCCTCGG CCAGCAGCGA CGCACCGCTG AGCACCGCGC CCGCCACCGC ACGGCTGAAC 
AGCGAGACCG CCGGCAGCAT GGTCGATCGG ATGTCGATCA TGGCGCTCAA GATCGACGCG 
ATGCGCAAGC AGACGCAGCG CACCGATGTC GACGATGCAC ACCGCGCCAG CAGCCAGATC 
AAGCTCGACC GCCTGCTGCT GCAGCGCGTC GACCTGTCGA CTTGCCTCGA CGGCCTGCTG 
GCCGAGTGCG TGGCCGGCCG CGCCTGCTTC AAGGTCTACC GCCAGTTCAA GATGTACAAC 
GACGCGCGCT TCAACCCCGC CCTGGTGGCC GAGCGGCTGG CCGCGCGTGG CTGA
 
Protein sequence
MSTPVLTARA VTDLHDNLLA NPGWPASVDL IPAEPLWHWI ATNHRNNCLL WAEEDLARRT 
TVSDAEIAKN KRAIDGYNQA RNDATERVDE ILLIALGLVD PASASSDAPL STAPATARLN 
SETAGSMVDR MSIMALKIDA MRKQTQRTDV DDAHRASSQI KLDRLLLQRV DLSTCLDGLL 
AECVAGRACF KVYRQFKMYN DARFNPALVA ERLAARG