| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0968 |
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| Symbol | |
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| ID | 6163032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1034379 |
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| End bp | 1035308 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641663719 |
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| Product | lipopolysaccharide heptosyltransferase I |
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| Protein accession | YP_001790005 |
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| Protein GI | 171057656 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACG TGGTGCACAC GCTGCCGGCG ATCACCGACA TCGCCCGCGC GCATCCCGGC
GCCGTGATCG ACTGGCTGGT GGAGGCGCCG TTCGCGGCGA TCGCCGCGCT GCATCCTGCC
GTGCGGCGGG TGCTGCCGAT TGCCTGGCGC AAGTGGCGCA AGTCGTTGCG CAACCCGGCC
ACCCGCGCGG CCATCCGGCA ACTGCGCGCC GACCTGCAGG CCGAAACCTA TGACCTGGTG
ATCGACTTCC AGGGCCTGCT CAAGAGCGTG CTGTGGGCGG TGCAGGCGAA CGGCCCGCGC
GCCGGTTATG ACCGCAAGAG CATCCGTGAA CCGCTGGCGG CGCTGTTCTA CCAGCGGCGC
GCCGCCGTGT CGCGATCGCT GCATGCGGTC GACCGCAGCC GCCGGCTGGC CGCCGCGCAC
CTGGCTTATG CGCTGCCGTC CGGCGCACCG GATTTCGGGC TGCGGGCGCC GACACCGACC
TGGCAGCCGC CGTCGCCCCA TGCCGTGCTG ATCCCTTGCG CCAGCCGGCC GGAGAAGCTC
TGGCCCGAAG CGGACTGGCA AGCCGTGCTC GCGCAGGTGC AAGCCCAGGG CTGGACGCCG
GTCATCCTGT GGGGCAGCCC GCAGGAACAG GCATTGGCCC GGCGCATCGC GGGTGACAGC
GGCGCGGTGG TGCCGCCGTT CCTGAGCGTG GGCGACAGCG CGGCGGTGCT CGCCGGCGCG
CGGCTGGTGG TCGGGCTGGA CACCGGTTTC ACGCATCTGG CCGCGGCATT CGACCGGCCG
ACCGTGGGCA TCTACTGCGA CCACGAACCC GGTCTGGCCG GTGTGACGGG CGCGGGCTTC
GTGCGCAGCC TGGGCGGCAA GGGGCAGGTG CCGAGCCGGG CCGACGTGCT GGCGGCCTTT
CGCGCCGCCT TGCCACACGT CGAAGCCTGA
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| Protein sequence | MGDVVHTLPA ITDIARAHPG AVIDWLVEAP FAAIAALHPA VRRVLPIAWR KWRKSLRNPA
TRAAIRQLRA DLQAETYDLV IDFQGLLKSV LWAVQANGPR AGYDRKSIRE PLAALFYQRR
AAVSRSLHAV DRSRRLAAAH LAYALPSGAP DFGLRAPTPT WQPPSPHAVL IPCASRPEKL
WPEADWQAVL AQVQAQGWTP VILWGSPQEQ ALARRIAGDS GAVVPPFLSV GDSAAVLAGA
RLVVGLDTGF THLAAAFDRP TVGIYCDHEP GLAGVTGAGF VRSLGGKGQV PSRADVLAAF
RAALPHVEA
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