| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0962 |
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| Symbol | |
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| ID | 6161471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1027526 |
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| End bp | 1028407 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663713 |
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| Product | prephenate dehydrogenase |
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| Protein accession | YP_001789999 |
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| Protein GI | 171057650 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC AACTGGGCGT GATCGGCTGC GGCCTGATGG GGGGCAGTTT TGCGCTCGCC
CTCAAGCGTG CGGGCCTGGT GCAGCGGGTG GTGGGCTACA GCAAGTCGCC GTCGACGGTG
GAGCGCGCCA AGCGCATGGG CGTGGTCGAC ATCGGCGCCG AATCGGCGCT GCTGGCGGTT
TCGGGCTCCG ACATCGTGCT GATCTCGGTG CCGGTGGCGG CCAGCGAAGC CACCTTCAAG
GCGATCCGCC ACGGCGTCGA GCCGGGTGTG CTGGTGATGG ACGTCGGCAG CACCAAGCGC
GAGGTGGTCG ATGCGGCGCG CCGCGTGCTC AAGGAACGCC TCACGAGCTT CGTGCCGGCG
CACCCGATCG CCGGCAAGGA AGTCGCCGGA GTCGATCACG CCGATTCGCA GCTCTACCAG
GGCAAGCAGG TCATCCTGAC GCCGCTGGCG CAGACCGATC CGGTGCTGGT CCAGAAGGCC
ACCGACGTGT GGGCGGCGAT CGGCTGCCAG GTGCTGCGCA TGACGCCCGA GAACCACGAC
ACCGCGTTCG CCGCCGTCAG CCACCTGCCG CACATGCTGG CGTTCGCGTA TTTCAACGCG
GTGATGTCGC AACCGGCCGG GCGCGAGTTC CTGTCGCTCG CCGGCCCCGG TTTCCGCGAT
TTCACGCGCA TCTCGGCCAG CGATCCGACG GTCTGGCGCG ACATCCTGCT GAGCAACCGC
GAAGAGGTCA TCAAGCAGTC GCAGCGCCTG CGTCACGCGC TCGATGCCTT CGAGCACGTG
ATGCGCTCGG GCAACCAGGA GGCGCTCGAG GACCTCATCC GCACCGCCTC CGACGGCCGT
GCCGGCTGGC AGATGAATGC CCGACCCGGC CCGCCGCGCT GA
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| Protein sequence | MFKQLGVIGC GLMGGSFALA LKRAGLVQRV VGYSKSPSTV ERAKRMGVVD IGAESALLAV
SGSDIVLISV PVAASEATFK AIRHGVEPGV LVMDVGSTKR EVVDAARRVL KERLTSFVPA
HPIAGKEVAG VDHADSQLYQ GKQVILTPLA QTDPVLVQKA TDVWAAIGCQ VLRMTPENHD
TAFAAVSHLP HMLAFAYFNA VMSQPAGREF LSLAGPGFRD FTRISASDPT VWRDILLSNR
EEVIKQSQRL RHALDAFEHV MRSGNQEALE DLIRTASDGR AGWQMNARPG PPR
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