| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0954 |
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| Symbol | |
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| ID | 6160125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 1017147 |
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| End bp | 1018313 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641663705 |
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| Product | integrase family protein |
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| Protein accession | YP_001789991 |
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| Protein GI | 171057642 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 106 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGCA CGATAGTTTT AGGAAGTGCC CCTGCGGGTG TCCTGCTGTC GGTGGCGATC
GATGAATTCA TTGATGAAGC CCAAGCGGGC AAAAAGTGGA CCGAGAAAAC GCGTGATCGC
TGGGTGGTGA CGTTTCGCAA CTTGACCGAG TTTCTTGGTG ACATACCTAT CCACTCGATC
AAGCGCCCTG CTTGTCGAGA CTTTTTCCAG CGACTGCAAC GCCTGCCCTC GAACGCAAAC
AAGATGGCGG CACTCAAGGG CAAGAACTTT CTAGAACTGA CCTCGCCCGA CATCGAAGGA
TTCGAGGTGC TGAGTGAAGG AACCGTGAAT GACCACATGA CCCGAATTTC TGGGTTTTTT
AAGTGGGCGG TCACACACTA CGAACTGAAA TCAAACCCCG CTGCCGGGTT ACAGATCGCA
GAAGTCGAAA CCACGAAGCG AATTCCGTTC ACAGAATCCG AGTTGCTGGC GCTGTTTGGG
CGCAAGGACT GGCAAAACCG GTCGTTTCTG CATCCGCACT ACTACTGGGT CATGCTTCTG
GGGTTGTTCA CGGGCGCACG GTTGAACGAA TTGTGTCAGT TGCGACTCGT GGACTTCTTC
CAGGTCGAAG GCGTTGATGT CATCAGCATC GCCGATGAAG AAGGCGAAGG ACTGCGGAAG
AAAAACAAGA ATGCCCGGCG TCGCGTGCCG ATTCACCCGG AGTTGATCCG ACTGGGTTTG
CTGCGCTGGG TTGAATCTCA ACGTGCTGCG GGTGGCGTGA ATCTGTTTGA TGAACTCAAG
CCGGGCCGGG ATGGGCACGG GCAAGCGGTC AGCAAATGGT TCGGAAAATA TCGCAAAGCC
TGCGGGATCG TTGAAACGCA ATCGAAGGTT TTCCATTCGT TTCGTTCTGG CCTAATTTCT
CAGTTGATGA ATGCCGATGT TGTTTTACAT AAGATCGCTC ACATCGTCGG ACATGAAACC
GGCACGGTCA CGGGTGATTC GTACTGGACT GATCGAGATG CAAAAGACGT TCTGCGGGTT
GTGGAGATAT TCACTCTGCC TGAATCTGTT CGGGCAGTAA TTCCAGAAAT TGAGGCAGTG
ACGTTTACAA AAGCCAAACC GGAAGCGGCA GAGAAAAAGA AACCAGTTAT CAAAGCAAAA
CGAAAACCTG CCGAAGTACA ATCTTAA
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| Protein sequence | MVGTIVLGSA PAGVLLSVAI DEFIDEAQAG KKWTEKTRDR WVVTFRNLTE FLGDIPIHSI
KRPACRDFFQ RLQRLPSNAN KMAALKGKNF LELTSPDIEG FEVLSEGTVN DHMTRISGFF
KWAVTHYELK SNPAAGLQIA EVETTKRIPF TESELLALFG RKDWQNRSFL HPHYYWVMLL
GLFTGARLNE LCQLRLVDFF QVEGVDVISI ADEEGEGLRK KNKNARRRVP IHPELIRLGL
LRWVESQRAA GGVNLFDELK PGRDGHGQAV SKWFGKYRKA CGIVETQSKV FHSFRSGLIS
QLMNADVVLH KIAHIVGHET GTVTGDSYWT DRDAKDVLRV VEIFTLPESV RAVIPEIEAV
TFTKAKPEAA EKKKPVIKAK RKPAEVQS
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