| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0948 |
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| Symbol | |
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| ID | 6160162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1010746 |
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| End bp | 1012053 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663699 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001789985 |
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| Protein GI | 171057636 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 113 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGTGG TGGTTTTGGG GGCCGGCATC ATCGGCGTCA GCACGGCCTG GCATTTGATG
GAACAGGGCC ACGAGGTCAC GCTGGTCGAT CGCCAGGCCG ATGCCGCGAT GGAAACCAGC
TTCGCCAACG GTGCGCAGAT CTCGGTGAGC TTCTGCGAGC CGTGGGCCAA TGCCGCTGCA
CCGTTCAAGG TGGCCAAGTG GCTGCTGCGC GACGACTCGC CGCTGCTGTT CCGGCCCCGG
CTCGATCCGC ACCAGTGGCG CTGGGGGCTG TCGTTCCTGG GGCAGTGCAG CGATGCGGCG
TTCGAGCGCA ACGTGCGCCA GCTGGTGGCG CTGGGCCGCT ACAGCCACCA GTCGCTCAAG
ACGCTGGTGG CCGCCACGGG CATCGAATAC CACCGCCTGG AGCGCGGCAT CCTGCATTTC
TTCTCCAGCC AGGCCGACAT GGATGCCGGC GCCGAGGCGG CTCGACTGAT GCGCGAGTTC
GGTGTCGATC GACGCATCCT CGACCGTGCC GAGGTTCTGG CGGTCGAGCC GGCACTGGCC
TCATGCGCCG ATCGCCTGGT GGGCGGGACC TACACGCCCA GCGACGAATC GGGCGATGCC
TGCGTCTTCA CCCAGGCGCT GGCACGCCGT TGTGCCGAGC GAGGGCTGGT GACCCATTTC
CGGCACGATG TGCATAGCCT GGACGTGCGT GGCGGTCGGG TGCACGGCGT GGTCGTGCGC
AGCCAGCACG ACGCACGGCG CATCACGGTG GCGGCTGATT CGGTCGTGGT GGCGCTCGGC
TCGTTCACGG CACCGCTGCT GCGCCAGGTG GGGGTGAACC TGAACATCTA TCCGGCCAAG
GGGTACTCCG CCACGTTCAA GCTCCGGCAT CCCGAGCGCG CCAGCACCGT CAGCATGATC
GACGATGCCC GCAAGATCGC GATCTCGCGC CTGGGGGACA CCATCCGGGT GGCCGGTACT
GCCGAACTGG CCGGCTATGA CGCGTCTCTC GAGGGCGCCA CCGCGCGTGT CCGCTGCGAG
GCGTTGCGAC GGCGCTACGA AGAGCTGTTT CCCGGCGTGG CGGACACGAC GGAGCCCAAC
TTCTGGGCCG GTCTGCGCCC CAGCACGCCG ACCAACATCC CCTACATCGG TCAGACGCCG
ATCGCAGGGC TCTGGGTCAA TGCGGGCCAC GGCACGCTCG GGTGGACGCA CGGTGCCGGG
TCTGGCCGGG CGCTGGCCGA ACTGATCAGC GGAGGCCAGC CCGAACTGGA TTTCGGCTTC
TACGGAGTCC GGCGTTCAGC GGCGGGTTGG CGGATCGCGG CAGCCTGA
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| Protein sequence | MRVVVLGAGI IGVSTAWHLM EQGHEVTLVD RQADAAMETS FANGAQISVS FCEPWANAAA
PFKVAKWLLR DDSPLLFRPR LDPHQWRWGL SFLGQCSDAA FERNVRQLVA LGRYSHQSLK
TLVAATGIEY HRLERGILHF FSSQADMDAG AEAARLMREF GVDRRILDRA EVLAVEPALA
SCADRLVGGT YTPSDESGDA CVFTQALARR CAERGLVTHF RHDVHSLDVR GGRVHGVVVR
SQHDARRITV AADSVVVALG SFTAPLLRQV GVNLNIYPAK GYSATFKLRH PERASTVSMI
DDARKIAISR LGDTIRVAGT AELAGYDASL EGATARVRCE ALRRRYEELF PGVADTTEPN
FWAGLRPSTP TNIPYIGQTP IAGLWVNAGH GTLGWTHGAG SGRALAELIS GGQPELDFGF
YGVRRSAAGW RIAAA
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