| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0939 |
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| Symbol | |
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| ID | 6159742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1002462 |
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| End bp | 1003925 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641663690 |
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| Product | peptidase U62 modulator of DNA gyrase |
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| Protein accession | YP_001789976 |
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| Protein GI | 171057627 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 124 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCC GCGAACCCAC CCTCGAACGC CTGGTCACAG CCCGTCAACT GCTGCTGGAG
CCCTTCGGTC TGACCGATGC CAGCCTCACG CAGGCGCTCA ACACGGTCGC GGCCCACAAG
GTCGACGATG CCGACCTCTA CTTCCAGTAC ACCCGCAGCG AGGGCTGGAG CCTGGAAGAG
GGCATCGTCA AGAGCGGCAG CTTCAGCATC GACCAGGGCG TGGGCGTGCG TGCCGTGGTG
GGCGAGAAGA CGGCGTTTGC CTATTCGGAC GACATCTCCG AGGCCGCCTT GCTCGATGCC
GCACGCACCG TGCGCACCAT CGCCTCGGCC GGCCTGAGCC GGCGCGTCAA GCTGGATGTG
CCGCAGCAGG TGGCCGGCAG TCGCACGCTC TACGCCAACA TGGACCCGAT TGCCACGCTC
GACAGCGCGC AGAAGGTGGC GCTGCTGGAG CGGGTCGAGA AACTCGCCCG CGCCAAGGAC
CCGCGCGTGG TGCAGGTGAT GGCCGGTCTG GCCGCCGAGT ACGACGTGGT GCTGGTGGCA
CGCGCCGACG GCACGCTGGC CGCCGACGTG CGCCCGCTGG TGCGCCTGTC GGTCACGGTG
ATCGCCGAGC AGAACGGCCG CCGCGAGGTC GGTTCGTCGG GTGGCGGCGG GCGCTTCGGC
TTCGGCTATT TCCAGGACGA CGTGATGTCG CGCTACGTCG ACCTGGCGGT GCACGCCGCG
CTCACCAACC TCGAGAGCCG CCCCGCGCCG GCCGGCGAGA TGACGGTGGT GCTGGGTTCG
GGCTGGCCCG GCATCCTGCT GCACGAGGCG GTCGGCCACG GGCTGGAAGG CGACTTCAAC
CGCAAGGGTT CGAGCACCTT CTCCGGCCGC ATCGGCCAGC GCGTGGCAGC CAAGGGCGTG
ACGGTGCTCG ACGACGGCAC CATCGCCGAT CGCCGCGGCT CGCTCAACGT CGACGACGAG
GGCCACGCCA CGCAGCGCAA CGTGCTGATC GAGGACGGCA TCCTCAAGGG CTACATCCAG
GACTCGCTCA ACGCCCGCCT GATGAAGACC GCGCCCACCG GCAACGGCCG GCGCGAGAGC
TACGCCCATG TGCCGATGCC GCGCATGACC AACACCTACA TGCTGGCCGG CGACAAGACG
CCCGAGGAGA TCATCGCCAG CATCGACCGC GGCCTCTACG CCAGCAACTT CGGCGGCGGC
CAGGTCGACA TCACGAGCGG CAAGTTCGTG TTCTCGGCCA GCGAAGCGTA TTGGGTCGAG
AAGGGCAAGA TCCTCTACCC GGTCAAGGGC GCGACGCTGA TCGGCAACGG CCCCGAGGCG
ATGATGCGGG TGTCGATGAT CGGCAACGAC ATGGCGCTCG ACCCGGGCGT GGGTACCTGC
GGCAAGGACG GCCAGAGCGT GCCGGTGGGC GTGGGCCAGC CGACGCTGCG CATCGACGGC
ATCACCGTCG GCGGCACGGC CTGA
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| Protein sequence | MISREPTLER LVTARQLLLE PFGLTDASLT QALNTVAAHK VDDADLYFQY TRSEGWSLEE
GIVKSGSFSI DQGVGVRAVV GEKTAFAYSD DISEAALLDA ARTVRTIASA GLSRRVKLDV
PQQVAGSRTL YANMDPIATL DSAQKVALLE RVEKLARAKD PRVVQVMAGL AAEYDVVLVA
RADGTLAADV RPLVRLSVTV IAEQNGRREV GSSGGGGRFG FGYFQDDVMS RYVDLAVHAA
LTNLESRPAP AGEMTVVLGS GWPGILLHEA VGHGLEGDFN RKGSSTFSGR IGQRVAAKGV
TVLDDGTIAD RRGSLNVDDE GHATQRNVLI EDGILKGYIQ DSLNARLMKT APTGNGRRES
YAHVPMPRMT NTYMLAGDKT PEEIIASIDR GLYASNFGGG QVDITSGKFV FSASEAYWVE
KGKILYPVKG ATLIGNGPEA MMRVSMIGND MALDPGVGTC GKDGQSVPVG VGQPTLRIDG
ITVGGTA
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