Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0929 |
Symbol | mscL |
ID | 6160051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 993457 |
End bp | 993879 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641663679 |
Product | large-conductance mechanosensitive channel |
Protein accession | YP_001789966 |
Protein GI | 171057617 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 118 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGT TGAGCGAATT CAAGGCGTTT GCCGTCAAGG GCAACGTGGT CGACCTGGCC GTCGGCGTGA TCATCGGTGG CGCGTTCGGC AAGATCGTCG AATCGCTGGT CGGCGACGTC ATCATGCCGA TCGTCAGCAA GATCTTCGGC GGGCTGGACT TCAGCAACTA CTTCATCCCG CTGGCCGGCC AGACCGCCAC CACGCTGGTC GAGGCCAAGA AGGCTGGCGC GGTGCTGGCC TACGGCAGCT TCATCACCGT GGCGATCAAT TTCATGATCC TGGCGTTCAT CATCTTCATG ATGATCAAGC AGATCAACCG ACTGCAGAGC GCCCCGGCAC CGGCGCCCGC ACCGGCCGAG CCGCCCCCGC CGGCCGAAGA CATCGTGCTG CTGCGCGAGA TCCGGGACTC GCTCAAGCGC TGA
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Protein sequence | MSVLSEFKAF AVKGNVVDLA VGVIIGGAFG KIVESLVGDV IMPIVSKIFG GLDFSNYFIP LAGQTATTLV EAKKAGAVLA YGSFITVAIN FMILAFIIFM MIKQINRLQS APAPAPAPAE PPPPAEDIVL LREIRDSLKR
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