Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0924 |
Symbol | |
ID | 6160046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 988960 |
End bp | 990156 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663674 |
Product | aromatic amino acid aminotransferase |
Protein accession | YP_001789961 |
Protein GI | 171057612 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAAC ACGTCGATGC CTATGCCGGC GACCCCATCC TGACGCTCAA CGAGAACTTC CAGAAGGACA CTCGCGCGGG CAAGATCAAC CTGTCGATCG GCATCTACTT CGACGACGCC GGCCGCCTGC CGGTGATGCA GGCGGTGCGC GAGGCCGAGA CGCAGATGCT GCAGGCGATC GGCCCCAAGC CCTATCTGCC GATGGTGGGC GCGGGCAACT ACCGCGAGCA GGTCCAGCAC CTGCTGTTCG GCGCCGACCA CGAAGCCGTG CGCAGCGGCC GCATCGCCAC CATCCAGACG CTCGGCGGCT CGGGTGGCCT GAAGGTGGGC GGCGACTTCC TCAAGAAGTA TTTCCCGGGC TCGGCGGTCT GGGTCAGCGA TCCGACCTGG GACAACCACC GCGCCATGTT CGAGGGCGCC GGCTTCGCGG TGCACACCTA TCCGTACTAC GACCCGGCCA CCGGCGGCCT GCGTTTCGAC GCCATGCTCG AGACGCTGCG CGGCCTGCCG CGCCACAGCA TCGTGCTGCT GCACGCCTGC TGCCACAACC CGACCGGTGT CGACCTGAGC CCGGCGCAGT GGCGAACGCT GATCCCCCTG CTGGCCGAGC GCGAGCTGCT GCCCTACGTC GACATCGCCT ACCAGGGCTT CGGTGACGGC GTGGTCGAGG ATGCCTTCGC GGTGCGCGCG CTGGCCGACG CCGGCATCGC GTTCTTCGTC GCCAACAGCT TCTCGAAGAG CTTCTCGCTC TACGGCGAAC GCGTCGGCGG GCTCAGCGTG GTCTGCCCGA CCGCGGCCGA GGCCGGCCTG GTGCTCGGCC AGCTGCAGAC CGCCGTGCGC AAGAACTACT CCAGCCCGCC CACGCACGGC TCGCAGATCG TCGCGCGCGT GCTCGGCACG CCGGCTCTGC ACCAGACCTG GAACGACGAG CTCAGCGCGA TGCGCCAGCG CATCAAGGCG ATGCGCGAGC GCCTGCACGC GGTGCTGAGC GCCAAGCTGC CCGGGCGTGA CTTCGGCTAT TTCCTGAGCC AGCGCGGCAT GTTCAGCTAC ACCGGCCTGA GCGCCGAGCA GGTCGACGAA CTGCGCGAGG TGCACGCCGT GTACCTGGTG CGCTCGGGGC GCATGTGCGT GGCCGGCCTG AACTCGGGCA ACGTCGAGGC CACGGCGACG GCGATCGCCG CGGTGCTCGC CCGCTGA
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Protein sequence | MFEHVDAYAG DPILTLNENF QKDTRAGKIN LSIGIYFDDA GRLPVMQAVR EAETQMLQAI GPKPYLPMVG AGNYREQVQH LLFGADHEAV RSGRIATIQT LGGSGGLKVG GDFLKKYFPG SAVWVSDPTW DNHRAMFEGA GFAVHTYPYY DPATGGLRFD AMLETLRGLP RHSIVLLHAC CHNPTGVDLS PAQWRTLIPL LAERELLPYV DIAYQGFGDG VVEDAFAVRA LADAGIAFFV ANSFSKSFSL YGERVGGLSV VCPTAAEAGL VLGQLQTAVR KNYSSPPTHG SQIVARVLGT PALHQTWNDE LSAMRQRIKA MRERLHAVLS AKLPGRDFGY FLSQRGMFSY TGLSAEQVDE LREVHAVYLV RSGRMCVAGL NSGNVEATAT AIAAVLAR
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