Gene Lcho_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0919 
Symbol 
ID6159900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp983855 
End bp984265 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content71% 
IMG OID641663669 
Productclass I peptide chain release factor 
Protein accessionYP_001789956 
Protein GI171057607 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGC TGCAGGTGCT GCCCGGCGAA GTGCACTGCA CGGCGATCCG CGCACAGGGT 
GCCGGCGGGC AGAACGTGAA CAAGGTGTCG AACGCGGTGC ACCTGCGTTA CGACATCCAC
GCTTCGAGCC TGCCCGACGA GGTCAAGGAG CGCCTGCTCG CCCTGCCCGA CCACCGCATC
ACGCGCGACG GCGTGGTGGT GATCAAGGCG CAGGAAAGCC GCAGCCTCGA GGCCAACCGC
GAACACGCGC TGGCGCGGCT GCAGACGATG ATCGATCAGG CCGCCAGCGT ACCGACGCTG
CGCAAGCCCA CCCGCGCCAC CGCCGGCTCG CAGCGGCGCC GGCTGGCGGG CAAGAACCTG
CGCGGCCAGG TCAAGGCGCT GCGCGGACGG GTCGGCCGCG ACGCCGACTG A
 
Protein sequence
MKPLQVLPGE VHCTAIRAQG AGGQNVNKVS NAVHLRYDIH ASSLPDEVKE RLLALPDHRI 
TRDGVVVIKA QESRSLEANR EHALARLQTM IDQAASVPTL RKPTRATAGS QRRRLAGKNL
RGQVKALRGR VGRDAD