| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0917 |
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| Symbol | |
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| ID | 6160249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 981754 |
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| End bp | 983124 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663667 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001789954 |
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| Protein GI | 171057605 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGCG ACAACAAGAC GATCTACACC TGCCGCGAAT GCGGCGGCAC CAGCGCCAAG
TGGCTGGGCA AATGCCCGCA CTGCAACGCC TGGAACACGC TCGAAGAAGG TGTCGCCGAG
CCGGCCGCCG GCACCGCCAA GAACCGCTTC CAGGGCCTGA CGCGCAGCCA GCCCGTCGCC
ACGCTGGGCG ACATCCAGGC GGCCGAGGTC TCGCGCACGC CCACCGGGCT GGAAGAACTC
GACCGCGTGC TCGGCGGTGG CATCGTCGAA GGTGGCGTGG TGCTGATCGG CGGCGACCCC
GGCATCGGCA AGAGCACGCT GCTGCTGCAG GCGGCCGAGG CGCTGTCGGC GCAGATGAAG
GTGCTGTACG TGACCGGCGA GGAGTCCGCC GCCCAGCTCG CGCTGCGCGC CCACCGGCTC
GGCCTGAGCG GGAAAAACCT GCGCGTGCTG GCCGAGATCG GGCTCGAGAA GATCCTCGCC
ACGCTCGAGG CCGAGCAGCC GGCCTTCTGC GTCATCGACT CGATCCAGAC GCTCTACTCC
GACCAGCTCA GCGCCGCGCC CGGCTCGGTG TCGCAGGTGC GCGAGTGCGC CTCGCACCTC
ACGCGCAGCG CCAAGGCGAG CGGCTGCACC GTCGTGCTGG TCGGCCACGT GACCAAGGAA
GGCGCCATCG CCGGCCCGCG CGTGCTCGAA CACATCGTCG ACACGGTGCT GTATTTCGAG
GGCGACACGC ACAGCAGCTT CCGCCTGGTG CGCGCGATCA AGAACCGCTT CGGCGCGGTC
AACGAGATCG GCGTGTTCGC GATGACCGAA CGTGGCCTCA AGGGCGTGGC CAACCCGAGC
GCGATCTTCC TGTCGACCCA CGGCGAGCCG GTGCCGGGCG CCTGCGTGCT GGTGACGCTC
GAAGGCACGC GGCCGATGCT GGTCGAGATC CAGGCGCTGG TCGACAACGG CGGCCCGAGC
CCGCGCCGGC TGAGCGTCGG CCTGGATCGC GACCGGCTGG CGATGCTGCT GGCGGTGCTG
CACCGCCATG CCGGCGTGGC CTGCGCGGAT CAGGACGTGT TCGTCAACGC GGTCGGCGGC
GTGCGCATCA GCGAGCCGGC GGCCGACCTG GCGGTGCTGC TGGCGATCCA GAGCTCGCTG
CGCGGGCGGG CCCTGCCGCG CGGATTCATC GCCTTCGGCG AGGTCGGTCT GGCCGGCGAG
GTGCGGCCCG CGCCGCGCGG CCAGGAGCGG CTGAAAGAGG CGGCCAAGCT CGGCTTTTCG
GTCGCGGTGG TGCCCAAGGC GAACGCGCCG AAGAAGCCGA TCGAGGGCCT GACGGTGCAT
GCGGTCGAGC GCATCGAGGA GGCGATCTCG CTGACCCGCT CGCTGACCTG A
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| Protein sequence | MARDNKTIYT CRECGGTSAK WLGKCPHCNA WNTLEEGVAE PAAGTAKNRF QGLTRSQPVA
TLGDIQAAEV SRTPTGLEEL DRVLGGGIVE GGVVLIGGDP GIGKSTLLLQ AAEALSAQMK
VLYVTGEESA AQLALRAHRL GLSGKNLRVL AEIGLEKILA TLEAEQPAFC VIDSIQTLYS
DQLSAAPGSV SQVRECASHL TRSAKASGCT VVLVGHVTKE GAIAGPRVLE HIVDTVLYFE
GDTHSSFRLV RAIKNRFGAV NEIGVFAMTE RGLKGVANPS AIFLSTHGEP VPGACVLVTL
EGTRPMLVEI QALVDNGGPS PRRLSVGLDR DRLAMLLAVL HRHAGVACAD QDVFVNAVGG
VRISEPAADL AVLLAIQSSL RGRALPRGFI AFGEVGLAGE VRPAPRGQER LKEAAKLGFS
VAVVPKANAP KKPIEGLTVH AVERIEEAIS LTRSLT
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