| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0915 |
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| Symbol | |
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| ID | 6160247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 978789 |
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| End bp | 981257 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641663665 |
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| Product | Hpt sensor hybrid histidine kinase |
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| Protein accession | YP_001789952 |
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| Protein GI | 171057603 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCTG CGGTCGTGGA CAGCCCGTCG GCCGATCTGC CGCTGTCGTC GACGCCATCC
GGGGTCGGGC GCACGGCCGG CCTGGGCCGC TGGCTGTCGC TGCTGGCGCT GGTGCTGCTC
GGCGTCTTCG CGGGCGTCGG CTGGGTGCAG TGGCAGTCGA TCTCGCTGCT CAACGCGACC
GTGCAATACC AGGGCGACAA CCTGGTCTGG AGCTTCTACC AGCTCGAAAG CGAATACGAG
AAGGTGCGCC TGGCCGCGCG CGAGCTCGAC CACGAGACCA CCCCCGAGGC GGTGGCCGCG
CTGCAGGCCC GCTACGAGGT GTTCGTCAGC CGCATCAGCC TGGTCGAGCC CGAGCGCACC
GAGTCGCTGT CGGTGCTGCT GCCGGCCCAG CGCGACGTGA TCGCCCGTGT GCACGCCTTC
GTCGAACGCA CCGACCAGCT CATCGGCCCG GACGCGACGC CGCCGATGGA CCCCGGCTTC
TGGCGCCAGT TCGCCGACGG CATGGCGCCG CTGTCGGTCG AGATCCACGA GCTGGCCCTG
CAGGCCAACC GCGACATCGC CGACCAGGTG GCGCTGCGCA ACGAGGCGGT GCGGCGGCAG
AACGGCATCG CGATCGGGCT GACGATCTTC CAGTCGCTGC TGACGCTGCT GTTCGCGGTG
GTGGTGGTGC GCCAGGTGCG GGCCCTGCAG CAGCGCCGCA CCCACCTCGA GGCGCTGGCC
GCCAACCTGC AGGAGGCGCG CATCGAGGCC GAGCAGGCCA GCCGCGCCAA GAGCGCCTTC
CTGGCCAACA TGAGCCACGA GCTGCGCACG CCGTTCAACG GCCTGCTGGG CATGCTGTCG
CTGCTGCAGC GCTCGCCGCT CGATGCCCGC CAGGCCGACT ACCTGCAGAC CGCGCGCGAA
TCCGGCGAGC ACCTGCTGGC CATCCTCAAC GACGTGCTCG ACATCTCCAA GCTCGAGTCG
GGCCGGCTCG AGATCACGCC CGAGCGGACC TCGCTGATCC GCGTGCTCGG CGACGTGCGC
TCGGTGATGA GCCCGCAGGC GCAGGCCAAG CACCTGCGCT GGAGCGTCAC GGTGGCCGAC
GACGTGCCGG TGTGGATCCG TGCCGATGCC AAGCGGCTCA AGCAGGTGCT GTTCAACCTG
GTCGGCAACG CCTTGAAGTT CACCGAGAAC GGCGAGGTCA GCGTGCACGT CGATTGCGTG
CCGGCACCGG CCACGGCGAG CGCGGCGCCC GGCGCGGCCG AGGCCGTGCC GGCCGCGACC
GCATGGCTGC GCTTCGCGGT CACCGACACC GGCATCGGCA TGGATGCGCT GACGCTGGCG
CGGCTGTTCC AGCGTTTCAG CCAGGGCGAC GAAACCATCA ACCGCCGCTT CGGCGGCACC
GGCCTGGGTC TGGAGATCTC GCGCACGCTG GCGCGCCGCA TGGGCGGCGA CATCACCGTG
CGCAGCGAAG CCGGCCGTGG CAGCGTCTTC ACCGTGCTGC TGCCGTTCGA GCGCATCGAT
GCGCCGCCGG CCGAGGACAC CGCCCCGGTC GTGCGGCCGG TGCCGGGCGG CGTCACCCCG
GCGGCCGACG GCCAGTCGGC CGACCCCGCC GGTGGCGCGC CGCTGCGGGT GCTCGTGACC
GACGACCACC CCGTCAACCG CAAGTTCATG CAGGCGCTGC TGCAGCAGCT CGGCCATCAG
GTGCACCTGC GCGAGAACGG TGCCGAGGCG CTCGAAGCGC TGCATGAGCA CACCTTCGAC
CTGATCCTGA TGGACGTGCA CATGCCCGTG ATGGACGGGC TGGCCGCCAC CCGCGCCATC
CGTGCGCTCG ACGGCGCGGC CGCGCAGGTC AAGATCGTGG CGCTCACCGC CGATGCCTTC
AGCGAATCGC GCCAGCGTGT CATCGACGCC GGCATGGACG ATTTCCTGGC CAAGCCGGTG
CAGATGCAGG ACGTCGAGGA GATGCTGCGC CGCAACTTCG GCGCGCGTGC GGTCTTCGAG
CCGGCGGTGC CGCCGGCCGA CTGGGCGCCA CCGCCCGAGC CCGCCGTGGT CGTCGCGCCG
TCGCAGCCCG CTGTCGCGAC CCTGGCGCCC GAGGTGTCCG CGCCACCCGC ACCGCGGCGC
CGCTTCAAGC GTGGCGACGC CTCGCGCGTG CTCGATCTCG AGGCCATCGG CGAAGTCTGC
CTGGCGGTCT CGATGGTGGG CTACGGCTCG CTGCTGAGCG GCTTCCTGGC CGACGAGTCG
CGCACCATCG CCGAGCTGAT CGAGGTGCTC GAAAGCCATG ACGTCGCCCG GTTCAAGGCG
GCCGCCCACA AGCTCAAGGG TGCCGCGGCC AACCTGGGCC TGCGCCTGCT GTCGGCCACC
GCGCGAGAGA TCGAGCAGGC CGAGGCCGAA CCGGACGAAG CCCGCAGCCG CGACTACGCG
CTGCGCCTGG CCGAGGAGCT GGACCTGACC CGCGCGCTGT GCACGCGGCT AGGCCTGTTA
GCCGGCTGA
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| Protein sequence | MKPAVVDSPS ADLPLSSTPS GVGRTAGLGR WLSLLALVLL GVFAGVGWVQ WQSISLLNAT
VQYQGDNLVW SFYQLESEYE KVRLAARELD HETTPEAVAA LQARYEVFVS RISLVEPERT
ESLSVLLPAQ RDVIARVHAF VERTDQLIGP DATPPMDPGF WRQFADGMAP LSVEIHELAL
QANRDIADQV ALRNEAVRRQ NGIAIGLTIF QSLLTLLFAV VVVRQVRALQ QRRTHLEALA
ANLQEARIEA EQASRAKSAF LANMSHELRT PFNGLLGMLS LLQRSPLDAR QADYLQTARE
SGEHLLAILN DVLDISKLES GRLEITPERT SLIRVLGDVR SVMSPQAQAK HLRWSVTVAD
DVPVWIRADA KRLKQVLFNL VGNALKFTEN GEVSVHVDCV PAPATASAAP GAAEAVPAAT
AWLRFAVTDT GIGMDALTLA RLFQRFSQGD ETINRRFGGT GLGLEISRTL ARRMGGDITV
RSEAGRGSVF TVLLPFERID APPAEDTAPV VRPVPGGVTP AADGQSADPA GGAPLRVLVT
DDHPVNRKFM QALLQQLGHQ VHLRENGAEA LEALHEHTFD LILMDVHMPV MDGLAATRAI
RALDGAAAQV KIVALTADAF SESRQRVIDA GMDDFLAKPV QMQDVEEMLR RNFGARAVFE
PAVPPADWAP PPEPAVVVAP SQPAVATLAP EVSAPPAPRR RFKRGDASRV LDLEAIGEVC
LAVSMVGYGS LLSGFLADES RTIAELIEVL ESHDVARFKA AAHKLKGAAA NLGLRLLSAT
AREIEQAEAE PDEARSRDYA LRLAEELDLT RALCTRLGLL AG
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