Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0906 |
Symbol | |
ID | 6162101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 970066 |
End bp | 971274 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663656 |
Product | acetylornithine aminotransferase |
Protein accession | YP_001789943 |
Protein GI | 171057594 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCG CCCCGACGTC CCTCGAACCG CATGTGATGA AGACCTACGG TCGCCTGCCG ATCGCCATGT CGCACGGCCG AGGCTGCCGA GTCTGGGACA CCGAAGGCCG CGAATACCTC GATGGCCTGG GCGGCATCGC CGTCAACACG CTGGGCCACG CGCACCCCAA GCTGGTGCCG GCGCTGCAGG AGCAGGTCGG CCGGCTGATG CACTGCTCGA ACTACTACCA CGTGCCCTTG CAAGAGGCGC TGGCGGCCAA GCTGGTCGAT CTGTCCGGCC TGACCAACGC CTTCTTCTGC AGCACCGGGC TGGAGGCCAA CGAGGCCGCG CTCAAGCTGG CGCGCAAGTT CGGCCACGAC AAGGGCATCG AGCGCCCGGA AATCATCGTC TACGAGCGCG CCTTCCACGG CCGCTCGATC GCCACGCTGT CGGCCACCGG CAACCCCAAG GTGCAGGCCG GTTTCGGCCC GCTGGTCGAG GGCTTCGTGC GGGTGCCGCT GAACGATCTG GCGGCGGTCG AGGAAGTGGC GCGCACCAAC CCGAACGTGG TGGCGGTGTT CCTGGAAACG ATTCAAGGCG AGGGCGGCAT CAACGCCTCG CGCTGGGACT ACCTGCAGAG CCTGCGCCGC CTGTGCGACC AGCAGGACTG GCTGCTGATG CTCGACGAGG TGCAGTGCGG CATCGGCCGC ACCGGCAAGT GGTTCGCGCA CCAGTGGGCC GGCATCGTGC CCGACGTCAT GCCGCTGGCC AAGGGCCTCG GCTCGGGCGT GCCGATCGGC GCGGTGGTCT GCGGGCCGAA GGCGGCGCAG ATCTTCCAGC CCGGCAACCA CGGCACCACC TTCGGCGGCA ATCCGCTGTC GATGCGTGCG GGCGTCGAGA CGCTGCGCAT CATGGAAGAC GAAGGCCTGC TGCAGAACGC CGCGCGTGTC GGCGGCATGC TGCGCGCCAG CCTGGAGCGC GAGCTCGCCG ACGTGGCCGG CGTGGTCGAG ATCCGTGGCG CCGGCCTGAT GCTGGGCATC GAACTCGACC GCCCGTGCGG CGAGATCCTG ACGCTGGCGA TGCAGGCCGG CCTGCTGCTG AGCGTGACGG CCGACCGCGT CATCCGCCTG GTGCCGCCGC TGATCCTGAG CGAGGCCGAG GCGGGCGAGA TCGTCGCCAT CCTGTGCCCG CTGATCAAGA ACTTCCTCGC CACGAGCCAG CCGTCATGA
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Protein sequence | MTAAPTSLEP HVMKTYGRLP IAMSHGRGCR VWDTEGREYL DGLGGIAVNT LGHAHPKLVP ALQEQVGRLM HCSNYYHVPL QEALAAKLVD LSGLTNAFFC STGLEANEAA LKLARKFGHD KGIERPEIIV YERAFHGRSI ATLSATGNPK VQAGFGPLVE GFVRVPLNDL AAVEEVARTN PNVVAVFLET IQGEGGINAS RWDYLQSLRR LCDQQDWLLM LDEVQCGIGR TGKWFAHQWA GIVPDVMPLA KGLGSGVPIG AVVCGPKAAQ IFQPGNHGTT FGGNPLSMRA GVETLRIMED EGLLQNAARV GGMLRASLER ELADVAGVVE IRGAGLMLGI ELDRPCGEIL TLAMQAGLLL SVTADRVIRL VPPLILSEAE AGEIVAILCP LIKNFLATSQ PS
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