Gene Lcho_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0900 
Symbol 
ID6162215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp964816 
End bp965424 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content74% 
IMG OID641663650 
Productphosphoribosyltransferase 
Protein accessionYP_001789937 
Protein GI171057588 
COG category[R] General function prediction only 
COG ID[COG1926] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCCC GTTTTGCCGA TCGCGCCGAG GCCGCCCGGT TGCTGGCGCG GGAAGTGGCC 
GCCCGCATGC TGCCGGCGCC GGTCGTGGTG CTGGCGCTGC CGCGCAAGAT CGGCGCGCCG 
TGGCAGCCCG AGCTGGCGAT CGCCGCGGTG GTGGACGGGG CCGCGCCCGA CATCGTCTTC 
AACGACGAGG TGATGGCGTG CAGCCGGATC GACCCCGACT ACATCGAGGC CCAGGTGCTG 
GCGCAGCTGC ACGAGATCCA CCGGCGTCGC GGCCTCTATC TGCAGGGTCG CCCGGCGGTG 
CCGCTGAAGG GGGCGACGGT GGTGGTGGTC GACGACGGCA TCGCCACCGG CACCACGCTG 
CGGGTGGCGC TCAAGGCGTT GCGGCGCCAG GCGCCGGCCC GCCTGGTGCT GGCGGTGCCG 
GTGGCGCCGC ACGACGTGCT CCAGAGCCTG CGCGGCGAAG TCGACGAGGT GGTCTGCCTG 
GCCGAACCCG ATCCCTTCGT CGCCATCGGC TGCCACTACC GCGACTTCCA TCAGGTCGGC 
GACGCCGAGG TGATCGCCGC ACTCGATGCG GCCCATGCCG CGCTGGCGCG CCCGCAGGCC 
GACGACTGA
 
Protein sequence
MSPRFADRAE AARLLAREVA ARMLPAPVVV LALPRKIGAP WQPELAIAAV VDGAAPDIVF 
NDEVMACSRI DPDYIEAQVL AQLHEIHRRR GLYLQGRPAV PLKGATVVVV DDGIATGTTL 
RVALKALRRQ APARLVLAVP VAPHDVLQSL RGEVDEVVCL AEPDPFVAIG CHYRDFHQVG 
DAEVIAALDA AHAALARPQA DD