| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0895 |
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| Symbol | |
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| ID | 6162359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 959122 |
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| End bp | 960030 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641663645 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001789932 |
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| Protein GI | 171057583 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGC CCCGATGCTC GGTGAACCAG ATTCCGCCTG CGCTGGCCAA GGGCGATGGC
TGCGACACCC TCAGCGGGCT GATCCATTGT TTCTCGCACG GTTTCCCGAC TCCCTTGGCA
CGTTGGCATC ACCATGACGT GCACGAGCTG CACATCATCA CCAGCACGTC CGGCCAAGCC
TTCGTGGGGG ACTGGATCGG CCCATTTCAC GCCGGGCATG TCGTGCTGGT CGGCCCACGT
CTGCCGCACA ACTGGGTGTC GATGGACGTG CCCGTTGGCG GTGTTGTCGA ACGCGACCTC
GTCATTCAGT TCGATCAGGC TCCGCTGTTG CGTGCATCGG CCACCATCCC CGAGCTGGCT
GACCTGAGCC CTCTGTTGGA ACGGGCCAGC AACGGCATCG AGTTCTTCGG CATGTCCGAT
CGCGCGGTCG CGCACTGGCG CCGCACGCAG GCAAGCCAGG GACTTCGGCG CTGGGTGGCT
TTCTGCGAGT TCATGGCTGA TCTGGCCACC TGTACCCATC ACCGCGTGCT GTCGAGCATG
CCGATGCAGG GTGGCGATGC GGCCGATATC CTCCCCCAGC TCGAGGCGCT CATCCTGGCG
CAGCCGACCA CGCTGCTACG GCCGATCTCG GTTGCGGCAT GCGCGGTCGA GCTGGGCATG
AGCGCGAGCC GGTTCAGCCG TTGCTTCCGC CGTGCCACTG GCAATACCTT CACCGACTTC
GTCAACCGGG TGCGGATCCA CAGGGCCGGC CAACTGCTGG CGGAGTCGGA CCGACGCATC
GTGGACATCT CTGGTGAGGT CGGCTTCCAG AATGTCGCCA ATTTCAATCG ACGCTTCCTG
GAGATCCAGG GCATGACGCC GAGCGAATTC CGCAGGCGTT CGCTTGATCG TGGCGTTCTG
GGCCGGTGA
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| Protein sequence | MPQPRCSVNQ IPPALAKGDG CDTLSGLIHC FSHGFPTPLA RWHHHDVHEL HIITSTSGQA
FVGDWIGPFH AGHVVLVGPR LPHNWVSMDV PVGGVVERDL VIQFDQAPLL RASATIPELA
DLSPLLERAS NGIEFFGMSD RAVAHWRRTQ ASQGLRRWVA FCEFMADLAT CTHHRVLSSM
PMQGGDAADI LPQLEALILA QPTTLLRPIS VAACAVELGM SASRFSRCFR RATGNTFTDF
VNRVRIHRAG QLLAESDRRI VDISGEVGFQ NVANFNRRFL EIQGMTPSEF RRRSLDRGVL
GR
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