| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0890 |
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| Symbol | |
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| ID | 6162610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 953207 |
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| End bp | 954049 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641663640 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001789927 |
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| Protein GI | 171057578 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCT GGCCACTGCT GCTGCCGTCG GTCAGCGTAT TGCTGGTCTG GATGATCGTC
CCGCTGGTGA TGACCATCTG GTATTCGCTG CAGAACTACA ACCTCCAGTC CCCGCCCGCG
CAATTTGGCG GGCTGTCGAA CTTCGAGTAT CTGTTCACCG ACCCGGACAT CCCGATCGTC
GTGTGGAACA CCTTGCTGCT GATCTTCGGG CCGCTTCTCA TCACCGTGTG CCTCGGCATG
GCCTTCGCTG TGCTCTACGA CGGGCCGTTT CCCGGGCGCA GCATCGCGCG GTTGCTTGTG
ATCACGCCTT TCTTCGTCAT GCCGACGGTT GCCGCGCTGG TGTGGAAGAA CCTCTTCTTC
CATCCGGTCT GGGGCCTGCT TGCATGGGTG GAAAAACTCT TCGGCATGCA ACCGATCGAC
TGGTTCTCCA GCCATCCGAT GGTGGCCGTC ATCATCATCG TGTCGTGGAT CTGGACCCCG
TTCGCGACGC TGATTCTGCT GACCGCCATG CAGTCGCTCG ACCGTGAACA GATCGAGGCT
GCGCGCCTGG ACGGCGCCAA GGCCGTCTCG CGCTTCATCC ACGTGGTGTT CCCGCATCTG
AAGCGACCGA TCTCGGTGCT GGTGATGCTG GAGACGATCT TCTTCCTGTC CACCTACGCC
GAGATCTACG TCACGACGAT GGGCGGGCCG GGGACTGCCA CGACCAACAT GCCGTTCTAC
ATCTTCTCGC GCGCACTGCA AGGATTCGAC GTGGGTCTCG CCTCGGCGGC GGGCCTGTTC
GCGATCCTGA TCGCCAACGT GGTCGCGTAC TTCTTCATCA AGCGGATCTC GGAGCACCTA
TGA
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| Protein sequence | MKRWPLLLPS VSVLLVWMIV PLVMTIWYSL QNYNLQSPPA QFGGLSNFEY LFTDPDIPIV
VWNTLLLIFG PLLITVCLGM AFAVLYDGPF PGRSIARLLV ITPFFVMPTV AALVWKNLFF
HPVWGLLAWV EKLFGMQPID WFSSHPMVAV IIIVSWIWTP FATLILLTAM QSLDREQIEA
ARLDGAKAVS RFIHVVFPHL KRPISVLVML ETIFFLSTYA EIYVTTMGGP GTATTNMPFY
IFSRALQGFD VGLASAAGLF AILIANVVAY FFIKRISEHL
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