| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0889 |
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| Symbol | |
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| ID | 6162609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 951782 |
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| End bp | 953089 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641663639 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001789926 |
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| Protein GI | 171057577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACA AACTCGCAAT CATCTCGGCT GCAGCCTTGC TTTCGATCGG CGGCGCCCAG
GCTGCGACGA CCCTGACCAT CGCGACGGTG AACAACCCGG ACATGGTGGT CATGCAGAAG
TACTCGGCGC AGTACGAGAA GGAAACCGGC GTGCAGCTCA AGTGGCTGGT GCTGGACGAG
AACACGCTGC GTCAGCGTGT CACGACCGAC ATCGCCACCA AGGGTGGCCA GTTCGACATC
ATCACCATCG GCCTGTATGA AACCCCGATC TGGGGCAAGC AGGGCTGGCT GCAGCCGTTC
GACAAGTTCT CGCCGAAGTA CGACGCCGAT GACATCCTGC CAAGTGTTCG CGACGCGCTC
TCGTACAAGG GAAAGATGTA CTCGGTGCCC TTCTACGCCG AGAGCTCGAT GACCTTCTAT
CGCAAGGATC TGTTCGAAGC GGCCGGCCTG AAGATGCCGG AGAACCCGAC CTGGACCCAG
ATCGGTGAAT TCGCCAAGAA GCTCGACAAC AAGCAGGCGG GCGTGCACGG CATCTGCATC
CGCGGCCTTC CCGGCTGGGG CGAGAACATG GCGCTGCTCG GCCTCGTGGG CAACGTTTTC
GGTGGCACGC AGTTCAACAT GAACTGGACC TCGGCCGTCA ACAGCAAGGC CTGGAACAAC
GCCATCAGCT TCTACGTTGA CCTGGCGAAC AAGTACGGCC CGCCCGGCGT CGTCGGCAAC
GGCTTCAACG AGAACCTGAA CCTGCTCGCA GAAGGCAAAT GCGCGATGTG GAACGACGCC
ACCGTCGCCG CCGGCCTGCT GTTCGACCCG AAGCGCTCCA AGGTGTCCGA CAAGCTGGGC
TTCGCCCAGA ACCCGGTCGA GACGTGGAAC AAGGGCGGCG CCTGGCTGTG GGCGTGGTCG
CTCGGCATTC CCGCGTCTTC GAAGAACGGC GACGAAGCGC GCAAGTTCAT CGAGTGGGCA
ACATCGAAGG AATACATCAA CATGATCGGC GAGAAGGAGG GTTGGGTGAC CATTCCGCCG
GGAACGCGCA AGTCGACCTA TGAGAACCCG AACTACCTCA AGGCCGCACC GTTTGCACTG
CCCACGCTGA AGGCCATACA GAGCGCCAGC CTGGTCGACA ACACGGCCGT GCCGAAGCCT
TATGTCGGCA TCAACTTCGC GATCATTCCG GAGATGCAGG CGGTGAACAA CTACCTGGGC
CAGCAGATCG CCGGAGCTTT GACGGGCAAG TCGACCGTGA AGGCGGCGCT CGACGCCGCC
GCGGCCAACT CCGACAAGGT CATGAAGAAG GCCGGCTACA TCAAGTAA
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| Protein sequence | MKNKLAIISA AALLSIGGAQ AATTLTIATV NNPDMVVMQK YSAQYEKETG VQLKWLVLDE
NTLRQRVTTD IATKGGQFDI ITIGLYETPI WGKQGWLQPF DKFSPKYDAD DILPSVRDAL
SYKGKMYSVP FYAESSMTFY RKDLFEAAGL KMPENPTWTQ IGEFAKKLDN KQAGVHGICI
RGLPGWGENM ALLGLVGNVF GGTQFNMNWT SAVNSKAWNN AISFYVDLAN KYGPPGVVGN
GFNENLNLLA EGKCAMWNDA TVAAGLLFDP KRSKVSDKLG FAQNPVETWN KGGAWLWAWS
LGIPASSKNG DEARKFIEWA TSKEYINMIG EKEGWVTIPP GTRKSTYENP NYLKAAPFAL
PTLKAIQSAS LVDNTAVPKP YVGINFAIIP EMQAVNNYLG QQIAGALTGK STVKAALDAA
AANSDKVMKK AGYIK
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