| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0887 |
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| Symbol | |
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| ID | 6163199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 950483 |
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| End bp | 951244 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663637 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001789924 |
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| Protein GI | 171057575 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA CGACGCAGGG TCTGGGATCC ATCGACCGCA CGTCCGAGGT GCCTTACTAC
CTTCAACTCG CGCGCTTGCT GGAACAGTCG ATCGACGCCG GCAGCTACGG GCCGGGCGAT
CGCCTGCCCG GCGAGACCGA GCTCTGTACC GACTACGGGC TGGCGCGCTC GACCGTGCGC
GAGACGTTGC GCCATCTGCT GGACCAAGGG CGCATTAAGC TGGTGCCACG TCGGGGTGCG
TTCGTGGCCG AGCGTATCGA TCCGGGATGG CGGCTGCAGG GGACACAAGG ATTCTTCGAG
GTGGAGGTCG ACCAGCACCA CAGTGTCGAG ACGCGGGTGC TGGAGGCGAC ACGCTGCGTT
CTGCCCGACG CGGCCGCCGC CGCGCTGGAA CTGCCACCGG CCTCGGCGGG CTTCAAGCTC
GCTCGCGTGC GCAGCCTGGA CGGCAAGCTG GCGCTCTATT CGATCAACTA CCTGCTTCCC
GAGGTCGAGG CCGTCCTGCG TGCCAGCGAG GTGATCACGG GTGTCGGCTC GCTGAACCGG
ACGCTGCAGT CGGCGGGATA TGCGACCGTC CGCGCACGCC GGACGGTGGA GGCCGTGGCG
GCGGACGAGG TCCTCGCAAC GCTCCTCGGT GTCCAGACCG GTCACCCCCT GCTGCTGGTG
ACGTCTGTTT CCTGGGACCG CGACAACAAG CCACTCGACT TCTACACGTC GTGGTTGCGC
AACGACATCG TCAAGGTGAC GGTCGAGGCT CAGGCAGCCT GA
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| Protein sequence | MNETTQGLGS IDRTSEVPYY LQLARLLEQS IDAGSYGPGD RLPGETELCT DYGLARSTVR
ETLRHLLDQG RIKLVPRRGA FVAERIDPGW RLQGTQGFFE VEVDQHHSVE TRVLEATRCV
LPDAAAAALE LPPASAGFKL ARVRSLDGKL ALYSINYLLP EVEAVLRASE VITGVGSLNR
TLQSAGYATV RARRTVEAVA ADEVLATLLG VQTGHPLLLV TSVSWDRDNK PLDFYTSWLR
NDIVKVTVEA QAA
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