| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0885 |
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| Symbol | |
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| ID | 6163197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 948356 |
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| End bp | 949357 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663635 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001789922 |
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| Protein GI | 171057573 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGCAG TGCGTATCGG TCTCGACCGG CTCATCGAGG TGGTCGACGT CTCCGAACCC
CGCCTCGACA GCGGCCACGT GATCCTGCGG CCGGTCGCCT GCGGCATCTG CGGCACCGAC
CTGCACATCT GCCAGCACGG CTTTCCGGGC ACGCAATACC CGGTGACGCC CGGCCACGAG
TTCGCCGGCC ATGTCGTCTC GGTCGGCAAG GACGTGACCG GCCTGAAGGA AGGCGACTTC
GTCGCGGTCA ACCCGAACGT GTCCTGCGGC CACTGCGAAT GGTGCCTGGA GAACAAGCCG
CACCTCTGCA ACGCCCTGAC GCCGATCGGC GTGGGCTGCG CCGGCGCGGC GGCCGAACTG
GTGGCAGTCC CGGCGAAGAA CGCCTTCCAG GTCCGCGAGA GCATCGGCCA CGGCGAGGCG
GCGCTGATCG AGCCGCTGGC CTGCGCGCTG CATGCGGTCG AATCGGCTGG TGGCGCAAAC
GGCGTCAAGG ATCGGCGCAT CCTGGTCCTC GGGGCTGGCA CGATGGGCCT GCTGATCACC
ATCATCTGCC GCCACTTCGG CGCGGCGGAG ATCACAGTGG TCGATCCGAA TCCGGGCAAG
CACGCCATGG CCCTGTCCGT CGGCGTCGAC CGGGCTCTGA CCCCTGGCCA GCTCGGCGAT
GGCGAACGCT TCGAGGTCAT CTTCGAAGCC GCCGGTGCGA TCCCGGCGCT GCGCCAGGCG
CTGCGTCACA TCCGCAAGAC CGGGCTTCTG GTGCAGGTCG GCGTGCACGA GGTGGCGACC
AAGGTGGACG TGCTGCCCTT CACCATCTAC GACCATGAGC TGCGCATCGT CGGGTCGAAC
TCGCTGGCCA ACCAGTTCCC GGCAGCCGTC GACCTGATGC ACGACGTGGC AGGCCAGGCT
GCCAAGCTCA TCGGCGACAC CTACTCCGTC TGGGACTTCA AGACGGCGGT GCAGGCGATG
GCCGGCGGTA CCGCCATCAA GACCCAGTTG CGCTTCGACT GA
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| Protein sequence | MRAVRIGLDR LIEVVDVSEP RLDSGHVILR PVACGICGTD LHICQHGFPG TQYPVTPGHE
FAGHVVSVGK DVTGLKEGDF VAVNPNVSCG HCEWCLENKP HLCNALTPIG VGCAGAAAEL
VAVPAKNAFQ VRESIGHGEA ALIEPLACAL HAVESAGGAN GVKDRRILVL GAGTMGLLIT
IICRHFGAAE ITVVDPNPGK HAMALSVGVD RALTPGQLGD GERFEVIFEA AGAIPALRQA
LRHIRKTGLL VQVGVHEVAT KVDVLPFTIY DHELRIVGSN SLANQFPAAV DLMHDVAGQA
AKLIGDTYSV WDFKTAVQAM AGGTAIKTQL RFD
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