| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0882 |
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| Symbol | |
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| ID | 6163194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 945163 |
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| End bp | 945390 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641663632 |
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| Product | phage transcriptional regulator, AlpA |
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| Protein accession | YP_001789919 |
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| Protein GI | 171057570 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAGGTG CCACCAATTC GATGACGATT GCTCAGGCCA CGGAATTCGC CGTGTTCCTG
CGCATCGGTG CCGTCACAAA GCTCACTGGT CTCGGCCGTT CGACAATCTA CCGCCTCATG
GCCGAAGCCA AGTTTCCGAC GCCGGTGCGA CTCTCGAGTC GTGCGATCGC GTGGCGTCGT
GCCGACCTCG ACCGGTGGAG TGCTGAACGA CCGCCGGCCT CTCATTGA
|
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| Protein sequence | MRGATNSMTI AQATEFAVFL RIGAVTKLTG LGRSTIYRLM AEAKFPTPVR LSSRAIAWRR
ADLDRWSAER PPASH
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