Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0859 |
Symbol | |
ID | 6160362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 923077 |
End bp | 923967 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641663609 |
Product | periplasmic component of the Tol biopolymer transport system |
Protein accession | YP_001789896 |
Protein GI | 171057547 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCAGGCA TTCTGACGAT CGAGGAACTG CGCCAGGAGC TGGCGCAACG TGCGTCCGTC AGCGTGCTCG AGACGCTGGA TGTCGAGACC GGCGCACGGA CCGTCCTGAA AGAATTCGAC GTGGTGATCG AGGCACCGAA CTGGACCCGT GACGGCCGCC GCCTGATCTT CAACAGCCTG GGCGGCATGT TTGCCTACGA GTTGTCGAGC GGCGAGGTGA CGCGCATCGA CACCGGCTTT GCCGTGGACT GCAACAACGA CCACGTGCTG TCGCCCGATG GCGCCCGACT GGCCATCAGC CACTTCGCCC ACGAGGACGT CTCGTCGCGC ATCTACATCG TGCCCTTGGG CGGCGGCGTC CCGGTGCGTG TGACCGACCT GGGCCCCAAC TACCTGCACG GCTGGTCACC CGATGGTCAG CGCCTGGCTT ATTGCGCCGA GCGTGACGGC CAGTACGACG TCTACACCAT CCCGGTCCAC GGTGGACCCG AGACGCGGCT CACGGATACC CCGGGCCTGG ACGACGGTCC GGAATATTCG CCCGACGGCC GGCACATCTG GTTCAACTCC ACCCGCAGCG GTCTGATGCA GGTCTGGCGC ATGGACATCC ATGGCCGGAA CCAGACGCAT GTCATCAAGG ACGACGCCAA CTGCTGGTTC CCGCATGTCT CGCCCGACGG CCAGCGGGTC GTCTACGTGG CCTACGACAA GGACAACGTG GCGCCCGGTG ACCATCCGCC CGATAAGCCG GTGGAGATCC GCCTCGTGTC GGCCGAAGGC GGCAAGCCCC GGACGATCGC GCAGCTGTTC GGCGGACAGG GCACCCTGAA CGTCAATTCA TGGGCGCCTG ACAATCGCCA TATCGCGTTC GTGTCGTATC GACCGGCGTG A
|
Protein sequence | MPGILTIEEL RQELAQRASV SVLETLDVET GARTVLKEFD VVIEAPNWTR DGRRLIFNSL GGMFAYELSS GEVTRIDTGF AVDCNNDHVL SPDGARLAIS HFAHEDVSSR IYIVPLGGGV PVRVTDLGPN YLHGWSPDGQ RLAYCAERDG QYDVYTIPVH GGPETRLTDT PGLDDGPEYS PDGRHIWFNS TRSGLMQVWR MDIHGRNQTH VIKDDANCWF PHVSPDGQRV VYVAYDKDNV APGDHPPDKP VEIRLVSAEG GKPRTIAQLF GGQGTLNVNS WAPDNRHIAF VSYRPA
|
| |