| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0845 |
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| Symbol | |
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| ID | 6161640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 905679 |
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| End bp | 907742 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641663595 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001789882 |
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| Protein GI | 171057533 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCC AGGATCACGC AGAGGGCGGC GTCACCGTCA TCACCCTCGA CAACCCACCG
CTCAACAGCC TCGGCCACGT GCTGCGCTCG CGCATCGTCG CAGCGATCGA GGTTGCCGAG
GTCGACCCCG CCGTGCGCGC CATCGTGCTC ACCGGCAGCC CCCGCGCCTT CTCGGCCGGC
GCTGATGTGA GCGAGTTCGG CACGCCGCGA CAGATGGCCG AGCCGATCTT GCGCAGCGTG
CTCGAACGCA TCCGCATCTG CACCAAACCC GTCGTCGCCG CGCTCGACGG CGTGGCGCTG
GGCGGTGGGC TGGAGCTGGC CCTGGCCTGC CATGCCCGCG TCGCGCTCGG CCAGGCCCGG
GTCGGCCTGC CGGAGATCAC GCTGGGCCTG ATCCCGGGCT CGGGCGGCAC CCAGCGCCTG
CCGCGCCTGG CCGGCATCGA CCTCGCGCTG ACGCTGATGC AGGGTGGCGC GCCGATGGCT
GCGGCACAGC TCGCCAGCAC CAGCCTGTTC GACCGGGTCG TCGACGACGG CCTGATCGAA
GCGGCCGCCG ATGTGGCCCG CCAGTTGGCA GATGCCGGCG CACCCTGGCC GCACGCCGAC
CGGCTGAACC TCGATGCCGA ATACGTCGCC ACGAAGGTGT CGCTGGCCCG GCAACGCCTC
AACGCGCGGC AACGCCTGCA GCCGGCCTAC GGCGCCCTGC TCGATGCCAT CGGCGCGTCG
GCAGGCCCGA TCGACGCGGG CCTGGCGCTG GAACGCGCGC GCTTTCTCGG CCTGATCGGC
ACGACCGAGG CGCAGGCGCT GCGCTACCAG TTCAAGGCCG AACGCGACAG CCATCGCCTG
CCCGACACAC TGCAGGTCGA GCCGCGCAAG GTGGCCACCG TGGCGGTGAT CGGTGCTGGC
ACGATGGGGG CCGGCATCGC GATCTGCGCT CTTGATGCCA CGCTCGACGT GATCCTGCTC
GAACAGGATG AAACCGCGCT CGCGCGCGGA CGCCAGCGTA TCGCCGACCA CTACGCCGGC
CGTGTCGCCG CTGGCAAGCT CGGCGCGGCA GTTGCCGACG CGGCGCAGGC CCGGCTGACC
GGCACCTGCG ACTGGCAGGC GCTGGCACGC GCCGATGTCG TGATCGAGGC TGTGTTCGAG
GAACTGTCGG TCAAGCAGGA TGTCTTCCGC CGCCTCGATG CCGTCGCGCG CCCGGGCGCC
GTGCTGGCCA CCAACACGTC CTACCTCGAC ATCGACGCGA TCGCCGCTGT CACATCACGC
CCGCAGGACG TGCTGGGTCT GCACTTCTTC AGCCCGGCCC AGGTCATGAA GCTGCTGGAG
GTGATCCGTG GCGCACACAC GAGCCCGGAC GCCATGGCCA CCGCGATGAC ACTCGGCCGC
ACGCTGCGCA AGGTGCCGGT GCTGTGCGGC AACGCCTTCG GCTTCATCGG CAACCGCATC
TACAACGCCT ACCGGCGGCA ATGCGAGTTC ATGCTCGAAG ACGGCGCCTG GCCCGAAGAG
GTCGATCAGG CCCTGACGGA CTTCGGCTTC GCGATGGGCC CTTTCGCGGT CGCCGACCTG
TCGGGCCTCG ACATTGCCTG GCGCATGCGC CGCGCACAGG CGGCCACGCG CGATCCACGC
GAGCGCCATG TGCCGGTGCT CGAACAGCTC TGCGAACAGG GCCGGCTCGG CCAGAAAAGC
GGCGCGGGCT ATTACCGCTA CGCCGATGGC AAACGCGCGC AGACGACTGA CGACACCGTG
CATGACCTGA TCGTGCAGGC GAGCGCCGCA CGCGGCATCC AGCGCCGCAC GCTGGCCCCG
CAAGAGATCC AGCGCCGCGC CCTGCTCGCG ATGGTCAACG AGGCGGCCTG CCTGTACGCC
GATGGCGTGG CGACCCGGCC GAGCGACATC GACGTCGTGC TGGTGCAGGG CTACGGCTTC
CCGCGCTGGC AGGGCGGCCC CGTGTTCTGG GCTCGACAGC AGGACCGCGA GCGCCTGGGC
GCCGACCTGC GCTGCCTCGT CGAGGCCGGC GGCCACGGCA TGCGCCTGGC CGATGACACG
ATGCTGGCGC GACTGCTGGA CTGA
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| Protein sequence | MKFQDHAEGG VTVITLDNPP LNSLGHVLRS RIVAAIEVAE VDPAVRAIVL TGSPRAFSAG
ADVSEFGTPR QMAEPILRSV LERIRICTKP VVAALDGVAL GGGLELALAC HARVALGQAR
VGLPEITLGL IPGSGGTQRL PRLAGIDLAL TLMQGGAPMA AAQLASTSLF DRVVDDGLIE
AAADVARQLA DAGAPWPHAD RLNLDAEYVA TKVSLARQRL NARQRLQPAY GALLDAIGAS
AGPIDAGLAL ERARFLGLIG TTEAQALRYQ FKAERDSHRL PDTLQVEPRK VATVAVIGAG
TMGAGIAICA LDATLDVILL EQDETALARG RQRIADHYAG RVAAGKLGAA VADAAQARLT
GTCDWQALAR ADVVIEAVFE ELSVKQDVFR RLDAVARPGA VLATNTSYLD IDAIAAVTSR
PQDVLGLHFF SPAQVMKLLE VIRGAHTSPD AMATAMTLGR TLRKVPVLCG NAFGFIGNRI
YNAYRRQCEF MLEDGAWPEE VDQALTDFGF AMGPFAVADL SGLDIAWRMR RAQAATRDPR
ERHVPVLEQL CEQGRLGQKS GAGYYRYADG KRAQTTDDTV HDLIVQASAA RGIQRRTLAP
QEIQRRALLA MVNEAACLYA DGVATRPSDI DVVLVQGYGF PRWQGGPVFW ARQQDRERLG
ADLRCLVEAG GHGMRLADDT MLARLLD
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