| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0841 |
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| Symbol | |
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| ID | 6161636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 901202 |
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| End bp | 902269 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663591 |
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| Product | ABC sugar transporter, periplasmic solute-binding protein |
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| Protein accession | YP_001789878 |
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| Protein GI | 171057529 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAGC ACATCCTTGG CGCCCTCGCC GCATCGATCC TCGCCAGCAC GGCCACCTCG
GCCATGGCCG AAGACAAGGT CTTCTTCCTG CTGCCCAACG CCACCACCAT CCGCTTCGAA
AGCCGCGACG CACCCTTCTT CATCGACGCG CTGAAGAAGA AGGCCCCGCA GGCCAAGGTG
ATCGTGCAGA ACGCCCAGGG CGATCCGTCG CGCCAGCAGC GCCTGGTCGA AGATGCGATC
TCACAGGGCG CCAAGGTGAT CGTCTACACG TCGGCCGACG CCAACCTGTC GGCGGGCAGC
CTGGCTGCCG CCGCTGCCGC CAAGGTGCCG GTCGTGCTGT ACGACCACGA CGCCGTCGGC
GGCAAGGCCG ATGCCCACGT GGTGTTCGAT TCGCTGTCGG TGGGCCAGGC CCAGGGCAAG
CGTGCGGCCG AGCTGATCAG CAAGATCAAC AAGCCGGTCG TCAAGGTGGC GCGCATCAAG
GGCAACCAGG GCGAATACGG CACCGGCCAG TACGAAGCCG GCCAGAACGA GTTCCTGAAG
CCGCTGATCG CGTCGGGCAA GGTCAAGGTG GTCTGCGAGC AGTACACCGA GAACTGGGAC
CCGGTGAAGG CCCAGTCGTT TGCCGAAGAC TGCCTGACCC GCAACAAGGG TGATGTCGAC
GTCTTCCTCG GCATGAACGA CGGCACCACC GGCGGCTCGG TCGCGGCCCT GATCAGCCAG
GGCTACAAGC CCGGCCAGAA GCTGGTGACC GGCGGCCAGG ACGCCACGGT CGAGGCGCTG
CGCTACATCG CCATGGGCTG GCAGGACAAC TCGGTCCTGA AAGACCTGAA GGTCGAGGCC
ACCTACGCCG CCGACGTCGT TGCCTCGCTG CTGGGCGGCA AGGGTGTGCC CAAGAACCTG
ATCAACGGCA AGGTGAACAA CAAGTTCATG GACGTGCCGG CGGTCTTCCT GCCGGTGAGC
AACATCACCG CCGCCAACCT GTCCGACGTG GTCAAGGCCG GTGTCTGGAC CTGGCCGCAG
ATCTGCCAGG GCATCCAGAA CACGCCGGTC TGCCAGGCCA ACAAGTAA
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| Protein sequence | MKQHILGALA ASILASTATS AMAEDKVFFL LPNATTIRFE SRDAPFFIDA LKKKAPQAKV
IVQNAQGDPS RQQRLVEDAI SQGAKVIVYT SADANLSAGS LAAAAAAKVP VVLYDHDAVG
GKADAHVVFD SLSVGQAQGK RAAELISKIN KPVVKVARIK GNQGEYGTGQ YEAGQNEFLK
PLIASGKVKV VCEQYTENWD PVKAQSFAED CLTRNKGDVD VFLGMNDGTT GGSVAALISQ
GYKPGQKLVT GGQDATVEAL RYIAMGWQDN SVLKDLKVEA TYAADVVASL LGGKGVPKNL
INGKVNNKFM DVPAVFLPVS NITAANLSDV VKAGVWTWPQ ICQGIQNTPV CQANK
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