| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0834 |
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| Symbol | |
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| ID | 6161490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 894529 |
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| End bp | 895413 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663584 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001789871 |
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| Protein GI | 171057522 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 98 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCAACA TCAACGAAGA CACCATCACC CAGGCGGTAC TGGCCGCCAT GGATCAATGC
CGTGATGCGC GCCTGCGCAC GGTCATGACC AGCCTGGTCC AGCACCTGCA TTCCTTCGCC
CGCGAGGTCA AGCTGACCGA GGCGGAGTGG TTCCAGGCGA TCCAGTTCCT GACCGCGGTC
GGCCACATCA CCGACGATGT CCGCCAGGAA TTCATCCTGT TGTCCGACGT GCTGGGCCTG
TCGACGCTGG TGACCGCGCA GAACAACGTC AAGCCCACTG GCTGCACCGA GGCCACCGTG
TTCGGACCGT TCTTCGTCGA GAACGCCCCC GACTATCCGC TCGGCGCCGA CATCTCGAAC
GGCGCGCGCG GCGAGCCGTG TTTCGTCAGC GGCCGTGTCA CCGGCATCGA CGGCCAGCCG
CTGGCCGGCG TGCTGATGGA CGTCTGGCAA TCGGACGAGG ACGGCTTCTA CGACGTGCAG
AAACCGCCGA CCACGGATCA GCCGCACACG CACCGGGCCC GCGGACGCAT CCGTACCGAT
GCGCAGGGCG GCTACCACTT CCGCTCGATC CTGGCGCAGC CCTATCCGAT CCCGCACGAC
GGCCCGGTCG GCAAGATGCT CGACGCGCTG GGCCGGCATC CCTGGCGGCC GGCGCACCTG
CATTTCATGC TGAGCGCACC GGGCCATGAG CGCCTGATCA CGCATGTCTT CCGGGATCAG
GACCGCTACC TCGACTCCGA TGCGGTCTTC GGCGTGCGCT CGACACTGAT CTCCGACTGG
GTCCGGCACG AGGCCGGAAC CGCGCCCGAC GGCACCGCGC TCGATCGGCC GTACTACACC
TTGAACTACG ACTTCGTGCT CAACCCCGCC AAGCGGGAGG CCTGA
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| Protein sequence | MRNINEDTIT QAVLAAMDQC RDARLRTVMT SLVQHLHSFA REVKLTEAEW FQAIQFLTAV
GHITDDVRQE FILLSDVLGL STLVTAQNNV KPTGCTEATV FGPFFVENAP DYPLGADISN
GARGEPCFVS GRVTGIDGQP LAGVLMDVWQ SDEDGFYDVQ KPPTTDQPHT HRARGRIRTD
AQGGYHFRSI LAQPYPIPHD GPVGKMLDAL GRHPWRPAHL HFMLSAPGHE RLITHVFRDQ
DRYLDSDAVF GVRSTLISDW VRHEAGTAPD GTALDRPYYT LNYDFVLNPA KREA
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