| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0832 |
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| Symbol | |
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| ID | 6160643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 893152 |
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| End bp | 893814 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641663582 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001789869 |
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| Protein GI | 171057520 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 99 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCACAA CCCCCAAGCG CTGGAACCGC GACGAGATGG CGCTGCGCGT GGCACGCGAC
ATCCCCGACG GCGCGGTCGT CAACCTCGGC ATCGGCCTGC CCACGCGGGT GGCCAACCAC
CTGCCGGCCG ACCGCGAAGT GATGATGCAC AGCGAGAACG GCGTCATCGG CATGGGCCCC
GCGCCGGCCG AAGGCGAGGA GGACTACGAC CTGATCAACG CCGGCAAGCA GCCGGTCACG
CTGCTGCCCG GCGGCTGCTT CTTCCACCAT GCCGACAGCT TCGCGATGAT GCGCGGCGGC
CACCTCGACA TCTGCGTGCT CGGTGCCTTC CAGGTGTCCG CCACGGGCGA CCTCGCCAAC
TGGCACACCG GCGCAGCGGA CGCGATTCCG GCCGTCGGCG GCGCCATGGA TCTGGCCGTC
GGCGCCAAGA AGACCTTCGT GATGATGGAG CACACCACCA AGTCGGGCGA GGCCAAGATC
GTTGCCGCCT GCACCTACCC GCTGACCGGC GTGGGCTGCG TCAGCCGGAT CTACACCGAC
CTCGCGGTGC TCGATGTCAC CGCCCAAGGA CTCGTCGTGA TCGACCTTGC GCCGGGTGTC
GAACTCGACG CGCTCCAGGC GCTAACCGGG GCAGCACTGC TTCAACTCGA TACCAAGCAT
TGA
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| Protein sequence | MSTTPKRWNR DEMALRVARD IPDGAVVNLG IGLPTRVANH LPADREVMMH SENGVIGMGP
APAEGEEDYD LINAGKQPVT LLPGGCFFHH ADSFAMMRGG HLDICVLGAF QVSATGDLAN
WHTGAADAIP AVGGAMDLAV GAKKTFVMME HTTKSGEAKI VAACTYPLTG VGCVSRIYTD
LAVLDVTAQG LVVIDLAPGV ELDALQALTG AALLQLDTKH
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