Gene Lcho_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0829 
Symbol 
ID6160640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp891261 
End bp891464 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content59% 
IMG OID641663579 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_001789866 
Protein GI171057517 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGTCG TTCGAGTGAG TTGGTTTGAA GGCAAGGACC ATGCGCAAAA GGAGAAGGTT 
GCCGCGGAGA TCACCGATAG CATCGTTCGT CACACGGCGA CCGACCCCAA CTACATCTAC
GTGATCTTCG AGGATGTGAA GGCGTCGGAC TGGGCCGGTG CCGGCAAACT CTTCGGGAAG
AGCCCGGAGG CTGGCGAAGG CTGA
 
Protein sequence
MPVVRVSWFE GKDHAQKEKV AAEITDSIVR HTATDPNYIY VIFEDVKASD WAGAGKLFGK 
SPEAGEG