| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0828 |
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| Symbol | |
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| ID | 6160639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 890213 |
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| End bp | 891118 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641663578 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001789865 |
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| Protein GI | 171057516 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 108 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG ATCCTCTTGC CGGGGTGGCC GTTTTCGTGG CGGCAGCACG CTCCCGTACG
TTCACCGATG CGGCAGAGCG ACTGGGCCTG ACGAAGTCGG CTGTCGGCAA GACAGTTGCT
CGCCTGGAAG AACGACTGGG TTTCAAGTTG TTCCACCGCA CGACCCGTCT CATGCGGCTC
ACTGCGGATG GCGAGGCGTA TCTGTCGGCG TGCACCGCGG CCATCGAGGA AGTGGCCGCA
GCCCAGGCCG CACTGTCGTC GCGCAACCAG ATCTTGAGCG GACGATTGCA CATCGACATG
CCGGTGGCCT TCGGAAGGCG CGTGCTGCTG CCTGTGCTGA TCGAGATCAC TCGACCTCAT
CCGGACTTGA GCCTGACCTT GACCTTCACG GACGCCACGA GTGATCTGCT TCAAGAAGAT
GTCGACCTGG CGATACGCTT CGGCGCGCTG ACGGACAGCA GTGATCTGGT TGCACGTCGT
CTCGTGACAC AGGAGCGCGT GATCTGCGCT TCACCCGAAT ACCTGCGGAT GCACGGCGAA
CCCATGACAC TGGCCGACGT CCGTGCGCAT CGTTGCATCG TGGGTAGCTT GAAGGGCCCC
CCACTCGTCT GGTTCGTCAG CGACGGCGGC GCGGTGGAGC GATTCACGCC GCCCGCCACG
CATCGTTTGA GCGATGGCGA GGCGATGATG GATGCTGCGA TCGGAGGGCT CGGGATCGTG
CAGTTGCCGA TCTCGCTGGT ACGTGAACCG CTCGCGGATG GGTCTCTGAG GTCGATCTTG
CCGGCGCACT CGGCTGTGGG TGTGGAAGTG CATGCCGTAT GGCCCCGGCA ACGGCATTTG
AGCCCTCGCG TGCGCTATGT GGTCGACCAA CTCGTCGCCT ACGCGGCGAA GGGCCGATTG
GATTGA
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| Protein sequence | MDRDPLAGVA VFVAAARSRT FTDAAERLGL TKSAVGKTVA RLEERLGFKL FHRTTRLMRL
TADGEAYLSA CTAAIEEVAA AQAALSSRNQ ILSGRLHIDM PVAFGRRVLL PVLIEITRPH
PDLSLTLTFT DATSDLLQED VDLAIRFGAL TDSSDLVARR LVTQERVICA SPEYLRMHGE
PMTLADVRAH RCIVGSLKGP PLVWFVSDGG AVERFTPPAT HRLSDGEAMM DAAIGGLGIV
QLPISLVREP LADGSLRSIL PAHSAVGVEV HAVWPRQRHL SPRVRYVVDQ LVAYAAKGRL
D
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