Gene Lcho_0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0827 
Symbol 
ID6163388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp889633 
End bp890184 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content65% 
IMG OID641663577 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_001789864 
Protein GI171057515 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG GCCAGATCCC CGCCGGTCAT GAACCGGTCC AGTCCTTCGC CGATTGCCAC 
ACCGGTATCG TGCAGGTGCT CAATGGCCTC GGAGAACTGC CGGCCTTGCT CGCATCGGCG 
CATAAGGCGC AGGCTGTCGC GGGCCAGGTC GATACATTTT TCCAGCAAGT CATCGTCCTG 
CACCACCGCG AAGAGGAAGA TGATCTCTTT CCGGCGGTGC TTGCCAGCGC GACGGCCGGG 
GAGGAGCGGG ACGAGGTCGA GCGACTGATC GCACGGCTGA CCTCCGAGCA TCGTCAACTG 
GAGGCCAGTT TCCACCGACT CCTGCCTGCC ATCGAGATGA TCCGCCACGG TGCCCTGGCT 
CCGCTCGATC GTGCTGATGT GGCCGGCCTG GTGCGCGAGT ACCTGGCTCA TGCGAGTTTC 
GAGGAGGCGA TCTTCCTGCC CAAGGCACAC GCCATCCTGG GCCGCAACAG CGACCACATG 
GCGGCGCTGG GCCTGTCGCT GCACATCCGG CATGCGTCCG AGGATGTGCG GCGTCGCTTC 
GGGAGCGTCT GA
 
Protein sequence
MSAGQIPAGH EPVQSFADCH TGIVQVLNGL GELPALLASA HKAQAVAGQV DTFFQQVIVL 
HHREEEDDLF PAVLASATAG EERDEVERLI ARLTSEHRQL EASFHRLLPA IEMIRHGALA 
PLDRADVAGL VREYLAHASF EEAIFLPKAH AILGRNSDHM AALGLSLHIR HASEDVRRRF 
GSV