Gene Lcho_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0826 
Symbol 
ID6163387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp889313 
End bp889636 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content65% 
IMG OID641663576 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001789863 
Protein GI171057514 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones108 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCG AGATCGCCGA TATCCGCATC CAGCCTGGCC GCCAGGCCGA CTTCGAACGC 
GCCGTGAAGC AGGGCTTCGA CGTGGTCTTC CCGCAGGCCA AGGGCTTCCT CGGGCATGAG
GTCCGACATG GCATCGAATC GCCGGAGCGC TACGTGCTGC TGCTGCACTG GGCCACGCTC
GAGGACCACA CGGTCGCCTT CCGGGGTTCG CCCTTGTATG CCCAATGGCG CGGCTTGGTA
GGCGAATTCT TCGCGCAGCC ACCGCTGGTC GAGCACTTCG ACCTGATCGG CCGGTCCGGC
GCGCCTGATG GAACTGCACG ATGA
 
Protein sequence
MILEIADIRI QPGRQADFER AVKQGFDVVF PQAKGFLGHE VRHGIESPER YVLLLHWATL 
EDHTVAFRGS PLYAQWRGLV GEFFAQPPLV EHFDLIGRSG APDGTAR