| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0824 |
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| Symbol | |
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| ID | 6163385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 888058 |
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| End bp | 888828 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663574 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001789861 |
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| Protein GI | 171057512 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 106 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTGA AGGACAAGGT GTGCGTGATT GCAGGTGCAG CCTCGCTGCG CAGCATCGGC
TACGCCACGG CTGAACTGTT TGTCGAACAC GGTGCGAAGG TCGTGGTCAC CGATCTCATG
ATGGACGAGC AGGTGCTCGC CGGCATCCGG TCGTCGATCG AGAGCCAGCT CAAGCGCCCT
GTGGAGATCC ACGGGTTGCG CTGTGACGTC AGCAAGGCCG ATGACTGCGA TCAACTGGTC
CGCCAGGTGC TCGATCTGCA CGGCACCATC GACTGCCTCG TCAACTCGGC AGGCATCGTC
AAGTCGACCC CGCTGCTGGA CATCGGCGCC CAGGAGCTGG ACCTGATGTT CGACGTCAAC
CTCAAGGGCG CCTTCTTCCT GTGCCAGAGC GTGCTGCGGG TGTTCGTCGA ACGCCGCGCG
GGCACCATCG TCAACGTCGC ATCGCTCGCG GCGCAGCGCG GTGGCGGACT TGTCGGCGGC
CCTCACTACG CGGCATCCAA GGGCGGCATG CTGAGCCTGA CGAGAAGCAT CGCGCGCGAG
TTCGGCCCTA TGGGCATTCG CGCCAATGCC ATCTGCCCCG CGATGATCGA CACGCCCATG
CTCGACGGCC TGCCGGCGGA TCGGCTGAGC GGCATCATCG ACGCGATCCC CCTGAAGCGC
ACCGGCACAC GGCGGGAAGC GGCCGGCGCC TGTCTCTTCC TGGCCTGCGA GCTGTCCGGC
TTCGTCACCG GTGCCACCCT CGACGTCAAT GGCGGTACCC ACATCCATTG A
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| Protein sequence | MLLKDKVCVI AGAASLRSIG YATAELFVEH GAKVVVTDLM MDEQVLAGIR SSIESQLKRP
VEIHGLRCDV SKADDCDQLV RQVLDLHGTI DCLVNSAGIV KSTPLLDIGA QELDLMFDVN
LKGAFFLCQS VLRVFVERRA GTIVNVASLA AQRGGGLVGG PHYAASKGGM LSLTRSIARE
FGPMGIRANA ICPAMIDTPM LDGLPADRLS GIIDAIPLKR TGTRREAAGA CLFLACELSG
FVTGATLDVN GGTHIH
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