| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0818 |
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| Symbol | |
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| ID | 6163603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 881321 |
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| End bp | 882550 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641663568 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001789855 |
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| Protein GI | 171057506 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 103 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCG AACCGTTGAA GGGCGTTCGC GTCCTCGATC TGACCAGTGT CGTGGTCGGC
CCGGTCTGTA CCTGGCGTCT GAGCCAATAC GGCGCCGAGA TCGTGAAGCT GGAAAGCCCG
GAGGGCGACC TGATGCGCGG GCTCGGCGGC CTGTCGCCGA CCGGGCAGCA CTCCGGCACC
TACCTGCATT TCAACCGCGG CAAGCGCAAC ATCTGCCTCG ACCTGAAGAA GGCCGACGCC
CGGCAGGCGC TGGATCGCCT GATTGCATCG GCCGACGTGA TCGTCGCCAA CATGCGCCCG
CAGGCGCTGG AACGCCTGGG CATCGACTCG GCCACCGTCC GAGCACGCCA CCCCGACAAG
ATCTACTGCC TGATCACTGG CTACGGCACC GACGGCCCCT ACGCCGGCCA GCCGACGTAC
GACAGCGTGG TGCAGGCCGC CGCCGGGATG GCCGGACTGA CGATCGCCCG CGACGGCGAG
CCGCGGTATG TCCCGATGCT GGTCTGCGAC CACGTGTCTG GCGAGATCGC GGCAGGAGCG
GTTCTCGCGG CCGTTCTGCA GCGACAGGCG AACGGCCAAG GATGCGCCAT CGAGATCCCG
ATGTTCGAGA CGATGGCCGC CTTCGTCCTG CAGGAGCACC TTGCGCAGCA CAGCTTCGAT
CCGCCGGTCG GCCCGCCGGG CGACCTGCGG CTGCTGAACC CGCACAACAA GCCGGTCAAG
ACTGCGGACG GCTGGATCGC CTTCACGGTC AACACCGACC CGCAAGTCCG GGCCCTCCTG
ATCGCCACCG ACCGCCAGCA CCTGCTCGAC GACGCCCGCT TCGCGACCGT TGCAGCACGA
GCCCGCAACG TGGCCCAGTG GTTCGAGATC CGCGGCGCAC CGCTGCCGAA TCGAACCACC
GCCGAATGGC TGGAGATCCT GCGTGCGGCG GACATCGCCG CCCAGCATTG CCACACGCTG
GAGACGCTTC CGCGCGATCC CCACCTGCAA GCGGTGGGGC TGATCCGCTA CGAGGCGCAC
CCGACCGAGG GCCGGACGGC CGCCATCCGC TCCACGGTCC GCTTCGACGA GGCCTACCCG
CCGCTGGGTG AGCCGGCCCG GCCCCGTGGC CTGGACACGC TCGCCGTGCT CGGCGAGCTG
GGCTATGCGG CCGACCAGAT CGAGACGCTG CTCTCGACGG GGGCGGCGCT CGTTCCCGCC
CCGCCCACGC CACCCGCTGC GGGCGGCTGA
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| Protein sequence | MAFEPLKGVR VLDLTSVVVG PVCTWRLSQY GAEIVKLESP EGDLMRGLGG LSPTGQHSGT
YLHFNRGKRN ICLDLKKADA RQALDRLIAS ADVIVANMRP QALERLGIDS ATVRARHPDK
IYCLITGYGT DGPYAGQPTY DSVVQAAAGM AGLTIARDGE PRYVPMLVCD HVSGEIAAGA
VLAAVLQRQA NGQGCAIEIP MFETMAAFVL QEHLAQHSFD PPVGPPGDLR LLNPHNKPVK
TADGWIAFTV NTDPQVRALL IATDRQHLLD DARFATVAAR ARNVAQWFEI RGAPLPNRTT
AEWLEILRAA DIAAQHCHTL ETLPRDPHLQ AVGLIRYEAH PTEGRTAAIR STVRFDEAYP
PLGEPARPRG LDTLAVLGEL GYAADQIETL LSTGAALVPA PPTPPAAGG
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