Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0804 |
Symbol | |
ID | 6162146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 865553 |
End bp | 867004 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641663554 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001789841 |
Protein GI | 171057492 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCC AACTTCTGAT CGACAACCTG GCGCGCAGCG CCAAGGACGG CGCCACCTTC GAACGCCGCC ACCCCACCAG CGGCAGCGTC GTGACCACGG CCGCAGCCGG CAGCGTCGAC GACGCGATCG CGGCGGTCGA CTCGGCGAGC ACCGCCTACA AGAGCTGGCG GCGCTCGGCG CCCAGCGAGC GCCGTCGCAT CCTGCTCAAG GCCGCCGATG CGCTCGAAGC ACGCACGCCG GCATTCATCG AAGCCATGGC GGCGGAGGTC GGTGCCTCCG CGCTGTGGGC CGGCTTCAAC GTCTACCTGG CGGCCAACCT GTTCCGCGAG GCGGCTTCAT TGGCCACGCA GATCCAGGGC GAGACCATCC CGACCGACAA GCCCGGTGCG CTGTCGATGA CGGTGCGCCA GCCGGTCGGC GTGGTGCTCA GCATCGTGCC GTGGAACGGC CCGGTGGTGC TGGCCGCACG TGCCATCGCC TATCCGATCG TCTGTGGCAA CACGGTCGTG TTCCGTGCCT CGGAATCGAG CCCGAAGACC CACATGCTGG TCGCCGAGGC ACTGGTCGAG GCCGGCCTGC CCGCCGGCGT GCTGAACGTG CTGACCAACG CGCCGCAGGA CGCGCCCGAG GTCATCGACG CGCTGATCGC ACACAAGGCG GTGCGCCGCA TCAACTTCAC CGGCTCGACG CGGGTCGGCC GCATCATTGC CCAGAAGGCG GCGACGCATC TCAAGCGCTG CCTGCTCGAA CTCGGCGGCA AGTCGCCGCT GGTGGTGCTC GACGACGCCA ACGTCGACGA GGCGGTCAAG GCCGCCGTGT TCGGCTCGTT CCTGTACCAG GGGCAGATCT GCATGTCGAC CGAGCGCATC GTGGTCGACG AATCGATCGC GGACGAGTTC GTCGCCAAGT TCGCCGCCCG TGCCCGCGAG CTGCCCTGTG GCGACCCGAT CAAGGAGCCG GGCTGCGTGA TCGGCCCGAT GATCGTCAAG GAGTCGGGTG CCCGCCTGAA CGCGATGATC GACGACGCCC TCGGCAAGGG CGCCCAGCTC GCCTGCGGCG GCTACGCCGA CGGCGCGCGC ATGCCCGCGA CCATCGTCGA CCATGTCAAG CCGGGCATGA AGATCTACGA CGAGGAGACC TTCGGCCCGA TCACCACGGT GGTCCGCGTG CAAGGCGTCG ACCAAGCGAT CGCGACGGCC AACGACACCC CCTACGGACT GTCGTCGGGC GTGTTCGGCC GCGATGTCAC GCGTGCGCTG GCGGTGGCGA TGGAGCTCGA ATACGGCTCG GTGCACGTCA ACGGCGCCAC CGTGCAGAAC GAGGCCCAGG CTCCGTACGG CGGCACCAAG GACAGCGGTT ACGGCCGCTT CGACGGCCGC GCGGTGATCG ACGAGTTCAC CGAACTGAAG TGGCTGACGA TCGAGCCCTC GGTCCAGCAG TACCCGGTCT GA
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Protein sequence | MDTQLLIDNL ARSAKDGATF ERRHPTSGSV VTTAAAGSVD DAIAAVDSAS TAYKSWRRSA PSERRRILLK AADALEARTP AFIEAMAAEV GASALWAGFN VYLAANLFRE AASLATQIQG ETIPTDKPGA LSMTVRQPVG VVLSIVPWNG PVVLAARAIA YPIVCGNTVV FRASESSPKT HMLVAEALVE AGLPAGVLNV LTNAPQDAPE VIDALIAHKA VRRINFTGST RVGRIIAQKA ATHLKRCLLE LGGKSPLVVL DDANVDEAVK AAVFGSFLYQ GQICMSTERI VVDESIADEF VAKFAARARE LPCGDPIKEP GCVIGPMIVK ESGARLNAMI DDALGKGAQL ACGGYADGAR MPATIVDHVK PGMKIYDEET FGPITTVVRV QGVDQAIATA NDTPYGLSSG VFGRDVTRAL AVAMELEYGS VHVNGATVQN EAQAPYGGTK DSGYGRFDGR AVIDEFTELK WLTIEPSVQQ YPV
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