| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0799 |
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| Symbol | |
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| ID | 6161115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 859151 |
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| End bp | 860197 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663549 |
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| Product | gentisate 1,2-dioxygenase |
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| Protein accession | YP_001789836 |
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| Protein GI | 171057487 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCG CAACCCTGAC TGACGACGCG CTACGCGCGC GCACCGCCTA CTACGAGCGC
ATCGGCAACC GCAACATGAC GCCTCTGTGG GAGGTACTCG GTGCGCTGGT ACCGCCCCAG
CCGCATTCAC CCGCACAGGC GGCGCTGTGG CGCTACGCCG AATTGCGTGA TCAGGTGATG
GAGGCCGGCC GCCTGATCAC GGCCGAAGAG GCCGAGCGCC GGGTCCTGAT ACTGGAAAAC
CCGGCGCTGC GCGGCCAGTC GTGCATCACG CAGTCGCTCT ATGCCGGCCT GCAGTTGATC
ATGCCCGGCG AGGTGGCCCC GGCGCATCGG CACACTCAGT CGGCCCTGCG CCTGGTGCTG
GACGGTGAAG GGGCATACAC AGCCGTCGAC GGCGAGCGCA CGACCATGCG CCGAGGTGAT
TTCATCATCA CGCCAGCCTG GACCTGGCAC GACCACGGCA ACCTGGGCGA CCAGCCGGTC
GTGTGGCTCG ACGGTCTCGA CATTCCCACC GTCCGATTCC TCGATGCCGG CTTCGCCGAA
AAGAGCGAGC AGTCGTCTCA GCAGACTCTG AGGCCTGAAG GGGATGCGCT GGCCCGCTAC
GGTTCCAACA TGGTCCCGAT GGACTACCAG CCCAAGCCGG CCGATCCGAC CCGCGTCTTC
GTCTACCCCT TCGATCGCAC GCGCTCTTCG CTGCGGGGGA TCGCGAAGGG GACACCGGAC
TCCCACCAAG GTTTCAAGCT GCGGTACGTG AATCCGGCAA CCGGCGCTTC GCCGATGCCG
ACGATCGGCG CATTCGCGCA ATGGTTGCCA GCGGGGTTCG AGACCCGCCC CTACCGCTGC
ACCGACGGCA CTGTTCACGT GTGCCTGGAA GGAGGCGGTG AGGCGAAGGT AGGCGACCAG
ACCTGGCGCT TCCAGGAAAA CGACGTCTTC GTCGTGCCCT CATGGCACAC GCTGCAACTG
CGTGCCGACC GGGATGCATT GCTGTTCAGT TTCTCTGACC GCCCGGTGCA ACAGGCACTC
GGCTTGTGGC GCGAACAGCG CCTGTGA
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| Protein sequence | MHAATLTDDA LRARTAYYER IGNRNMTPLW EVLGALVPPQ PHSPAQAALW RYAELRDQVM
EAGRLITAEE AERRVLILEN PALRGQSCIT QSLYAGLQLI MPGEVAPAHR HTQSALRLVL
DGEGAYTAVD GERTTMRRGD FIITPAWTWH DHGNLGDQPV VWLDGLDIPT VRFLDAGFAE
KSEQSSQQTL RPEGDALARY GSNMVPMDYQ PKPADPTRVF VYPFDRTRSS LRGIAKGTPD
SHQGFKLRYV NPATGASPMP TIGAFAQWLP AGFETRPYRC TDGTVHVCLE GGGEAKVGDQ
TWRFQENDVF VVPSWHTLQL RADRDALLFS FSDRPVQQAL GLWREQRL
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