| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0797 |
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| Symbol | |
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| ID | 6161151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 857142 |
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| End bp | 858401 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641663547 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001789834 |
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| Protein GI | 171057485 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA CATCGACGGT CTTTCCGACC GAGGCGCACT GGGAGGGCGA CGGCACGCAC
CGCATCCCAT TCGTGGCTTA CACCAGCGAC GAGATCTACA AGAAGGAGCT CGAACGCTTC
TTCTACAACA GCCATTGGTG CTACGTCGGC CTGGAGGCCG AGGTGCCGAA TCCGGGCGAC
TACAAGCGCA CGGTGATCGG CGAACGTTCG GTGATCCTGG TGCGCGATGC CGACGGCGCG
ATCAACGTGG TCGAGAACGT CTGCGCGCAC CGCGGCATGC GCTTCTGCCG CGAGCGTCAC
GGCAACAGCA AGGAATTCGT CTGCCCGTAT CACCAGTGGA ACTACACGCT CAAGGGCGAT
CTGCAGGGCG TGCCGTTTCG CCGCGGCGTC AAGCAGGACG GCCAGGTGCA CGGCGGCATG
CCGGCAGATT TCAAGACCAC CGATCACGGC TTGACCAAGC TGAAGGTCGC CAGCCGCGGC
GGGGTCGTGT TCGCGTCCTT CGACCATGAG GTCGAGTCTC TGGAGGACTA CCTCGGCCCG
ACCATCCTCG GCTACTTCGA TCGCCTCTTC AACGGCCGCA AGCTCAAGAT CCTGGGCTAC
AACCGCCAGC GCATCCCGGG CAACTGGAAG CTGATGCAGG AGAACATCAA GGACCCGTAT
CACCCGGGCC TGCTGCACAC CTGGTTCGTC ACCTTCGGCC TCTGGCGCGC CGACAACAAG
TCGCAACTGA GGATGGACGA CAAGCACCGC CATGCGGCGA TGATCTCGAC GCGCGGCCAG
GGCGGCAAGG CCGGGCAGGT GACGCAGGTG TCGAGCTTCA AGGAAGAGAT GAAGCTCAAC
GACCCGAGCT TCATCGACAT CGTGCCCGAG CCCTGGTGGG GCGGGCCGAC GGCGGTGATG
ACGACGATCT TCCCGAGCGT GATCCTGCAG CAGCAGGTCA ACAGCGTCAG CACCCGCCAC
ATCCAGCCCG ACGGCCACGG CAGCTTCGAC TTCGTCTGGA CGCATTTCGG CTTCGAGGAC
GACAGCGAAG AGATGACGCA GCGCCGGCTG ACCCAGGCCA ACCTGTTCGG CCCGGCCGGC
TTCGTCTCGG CCGACGACGG CGAGGTGATC GAGTTCTCGC AGCAGGCCTT CGAGAGCAAG
CCCTTCCACC GCGCCGTCGC CGAACTGGGC GGGCACACGG TCGAGAACAC CGAACACATG
GTGACCGAGA CGCTGATCCG CGGCATGTAC CGCTACTGGC GCGACGTGAT GGAGGCCTGA
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| Protein sequence | MSETSTVFPT EAHWEGDGTH RIPFVAYTSD EIYKKELERF FYNSHWCYVG LEAEVPNPGD
YKRTVIGERS VILVRDADGA INVVENVCAH RGMRFCRERH GNSKEFVCPY HQWNYTLKGD
LQGVPFRRGV KQDGQVHGGM PADFKTTDHG LTKLKVASRG GVVFASFDHE VESLEDYLGP
TILGYFDRLF NGRKLKILGY NRQRIPGNWK LMQENIKDPY HPGLLHTWFV TFGLWRADNK
SQLRMDDKHR HAAMISTRGQ GGKAGQVTQV SSFKEEMKLN DPSFIDIVPE PWWGGPTAVM
TTIFPSVILQ QQVNSVSTRH IQPDGHGSFD FVWTHFGFED DSEEMTQRRL TQANLFGPAG
FVSADDGEVI EFSQQAFESK PFHRAVAELG GHTVENTEHM VTETLIRGMY RYWRDVMEA
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