| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0793 |
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| Symbol | |
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| ID | 6161147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 854163 |
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| End bp | 855083 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663543 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001789830 |
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| Protein GI | 171057481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.901447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAA CGCTGCTGTT GGCTCAGCTG CTCAACGGCC TGCAGTACGG CGTCCTGCTG
TTCCTGCTGG CGGCGGGCCT GACGCTGGTG TTCGGGATCA TGAGCTTCGT GAACCTGGCC
CATGGCTCTC TGTACATGCT GGGCGCCTAT GCGGCAGCGA TTGCCTATGA CGCCACGGGC
TCCTTCGTGC TGGCGATTCT GGCGGCCATG GGCACAGCCT TGCTGATCGG CCTGGTGCTG
GAGGTGTCGA TCGTCTCGCG CCTGTATCGG CGAGATCACC TCGACCATGT GCTCGCGACC
TTCGGACTCG TGATGTTCTT CAACGAGATG GTGCGGATGG TGTGGGGACC ACAACCCCTG
TTTGTCCAGG TGCCGGAGGT GCTGAGCGGG ACGGTCGATA TCGTCGGGTT CAGCTACCCG
TCCTATCGCT TCGCCATCAT CTTCACCGGA TTGCTGGTCG CGGTGGGCTC ACATCTGCTC
ATCAACAAGA CGCGCATCGG CATGCTGATC CGCGCTGGCG CTCAGAACCC GCAACTGGTC
GGTGCCCTCG GCGTGAACAT CGGCCTGCTC AATGCCATGC TCTTCGGTGT GGGCGCCATG
CTCGCCGGCC TGGCAGGGGC GATGGCCGGT CCCGTGCTGT CGGTGCAATC GGGCATGGGC
GAACCGGTAC TGATCACCAC GCTGGTGGTG ATCGTGATCG GCGGCATCGG TTCTGTCAGC
GGCGCGCTTT ACGCCGCACT CATCGTCGGC CTGGTGGATA CGCTCGGACG GGTGTTCCTG
CCCCTGCTGC TGCGGCAGGT CGCCGAACGC TCGATCGCCG ACGCGGCCGG CCCGGCACTG
GCCTCGATGA GCATCTACCT GCTGATGGCG CTGGTCCTCG CACTGCGCCC TCAGGGTCTC
TTTCCCGCCC GTCGCAGCTG A
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| Protein sequence | MSATLLLAQL LNGLQYGVLL FLLAAGLTLV FGIMSFVNLA HGSLYMLGAY AAAIAYDATG
SFVLAILAAM GTALLIGLVL EVSIVSRLYR RDHLDHVLAT FGLVMFFNEM VRMVWGPQPL
FVQVPEVLSG TVDIVGFSYP SYRFAIIFTG LLVAVGSHLL INKTRIGMLI RAGAQNPQLV
GALGVNIGLL NAMLFGVGAM LAGLAGAMAG PVLSVQSGMG EPVLITTLVV IVIGGIGSVS
GALYAALIVG LVDTLGRVFL PLLLRQVAER SIADAAGPAL ASMSIYLLMA LVLALRPQGL
FPARRS
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