| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0792 |
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| Symbol | |
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| ID | 6161146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 853143 |
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| End bp | 854150 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663542 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001789829 |
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| Protein GI | 171057480 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.756221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCA ACCTGACTCG TCCGGCCACG GCGATCCCGC TGCTGCTCTT CATCGGCCTC
GCGACCGTGC CGTTCATCGC CAGTGCGCTG GAACAACCCT TCTGGACCTC GTTCTTCGCG
CGCATCGTCA TCTACGCCAT CGCCGCGACG GCGCTCAACC TGGCGCTGGG CTACGGCGGG
CTCGTCAGCT TCGGGCACGC GCTCTTTCTC GGCCTGGGCA GCTACGCCGT CGCGTTGCCG
GCCTTCCACG GCATTGAAAG CGGGTGGGTG CACCTGGCAC TGTGTCTGGT GGTCTGCAGC
GTGGGGGCAC TGGTGATCGG TGCGATCAGT CTGCGGACAT CCGGAATGGC TTTCATCATG
ATCACGCTCG CATTTGCACA GATGGGCTAC TTCCTGCTCG TTAGCCTCAA GCAGTACGGT
GGGGACGATG GACTTGCCGT CTCGACCACC AGCGCGTTCG GCTCGGTGAA CCTCGGCTCG
TCACACGTGC TGTACGCCGC GGCATGGGCC GTTCTCGCCA TGGTCACATG GTGGATGGCA
CGCCTTCGAT CGGCGCCGTT CGGCATGGCC CTTCGGGGCG CACGCCAGAA CGCGCGGCGC
ATCAACGCGA TCGGACTGCA GGCGCAGAAG CTGCAGCTGG TTGCCTTCAT CATCTCCGGC
GCCATCAGTG GTGTGGCGGG TCTGCTGCTC GCCAACCTGA ACGCGTATGC ATCGCCCAGT
TCGATGGCCT GGACCGTCTC CGGCGAGCTG ATCGTGATGG TGGTGCTGGG TGGCATCGGA
ACGGTGTTCG GTCCGCTGGT CGGTGCCTTG CTCTTCCTCG GCCTGGAAGA GGTGCTCAAG
GGTCTCACCG AACACTGGAT GGCAATCTTC GGTCCACTGA TCGTGCTGAT GGCGCTGGTC
GGGCGGCGCG GCGCTGTCGG CCTGCTGGAG AGCCTCGGCA ATTGGAAGCG TTCGACCGCA
GGACACGCCG AGTCGGCGGC ACCTGTCATT GCCGATGGAG GTGCGTGA
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| Protein sequence | MTLNLTRPAT AIPLLLFIGL ATVPFIASAL EQPFWTSFFA RIVIYAIAAT ALNLALGYGG
LVSFGHALFL GLGSYAVALP AFHGIESGWV HLALCLVVCS VGALVIGAIS LRTSGMAFIM
ITLAFAQMGY FLLVSLKQYG GDDGLAVSTT SAFGSVNLGS SHVLYAAAWA VLAMVTWWMA
RLRSAPFGMA LRGARQNARR INAIGLQAQK LQLVAFIISG AISGVAGLLL ANLNAYASPS
SMAWTVSGEL IVMVVLGGIG TVFGPLVGAL LFLGLEEVLK GLTEHWMAIF GPLIVLMALV
GRRGAVGLLE SLGNWKRSTA GHAESAAPVI ADGGA
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