| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0790 |
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| Symbol | |
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| ID | 6160734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 851667 |
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| End bp | 852386 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641663540 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001789827 |
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| Protein GI | 171057478 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.166269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC CCTACCTCTG CGTGCGTGGC TTGCAGGCCA GTTATGGCCG CGCGCAAGTG
CTCTTCGACG TGTCGTTCGA TGTCTTTCCT GGACAAGTCA TCACGCTGCT GGGTCGCAAT
GGCATGGGTC GCTCGACCAC CATCAAGTGC CTGTTCGGCA TGCTGCCCGC CACCGGCGGG
GCGATTGAAG TCGACGGACT GCAGACCATC GGACAGCCTT CTCATCGAAT CGCTCGCAGA
GGGCTCGCGC TGGTACCGGA GGGGCGTCAA ATCTTCACCG ACCTCACGGT CGAGGAAAAC
CTGATTGCCA CTGCAAGGCC CTCTCGTTCA GACAGTGGTA CGAACGCCTG GACGCTCGAT
CGGGTCTACA CCTTCTGGCC CAGGCTGAAG GAGCGTCGAA ACAACCTCGG CTGGCAACTC
TCGGGCGGAG AGCAGCAGAT GCTCGCCATC GGCCGGGCCT TGATGACCAA TCCCCGACTG
CTGGTTCTCG ACGAGGCAAC CGAAGGCCTG GCCCCAGTGA TCCGGGAGGA AATCTGGCGC
ACGCTGGCCG AGCTGAAACG CACGGGCCTG GCCCAGATCG TCATCGACAA GAACGTGAGG
CGATTGCTCG GCCTGGCGGA CCGGCACTAT GTGCTCGAGA AGGGCCGTGT CGTGTGGCAT
GGGGACTCCG ATGCCCTGCG GGCGCAGCCC GACATCGTCC ACCAATACCT CGGCGTCTGA
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| Protein sequence | MNQPYLCVRG LQASYGRAQV LFDVSFDVFP GQVITLLGRN GMGRSTTIKC LFGMLPATGG
AIEVDGLQTI GQPSHRIARR GLALVPEGRQ IFTDLTVEEN LIATARPSRS DSGTNAWTLD
RVYTFWPRLK ERRNNLGWQL SGGEQQMLAI GRALMTNPRL LVLDEATEGL APVIREEIWR
TLAELKRTGL AQIVIDKNVR RLLGLADRHY VLEKGRVVWH GDSDALRAQP DIVHQYLGV
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