Gene Lcho_0778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0778 
Symbol 
ID6163978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp841266 
End bp841565 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content61% 
IMG OID641663529 
Producttransposase IS3/IS911 family protein 
Protein accessionYP_001789816 
Protein GI171057467 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000787771 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAGA GAGAACGAAG GACATTCAAC GCGGAATTCA AGCTGCAAGT GGTGCAGATG 
ATTCGCGAGC AGGGCTTGAG CGTGGGCGAC GTCTGCCGCG ACATGAAGCT CGGCGAGACG
GCCGTGCGGC GATGGCTGGC GCAAGCCGAT GAAGAGGCTG CAGGCCGCCC CGGCATTGGC
AAACCGCTCA CCGCCGAGCA GCAACGCATC CGCCAGCTTG AGGCCGAGAA CAAGCAACTG
CGCGGCGACG TCGACATCTT AAAAAAAGCA TCGGCCTTCT TTGCCCGCGA GCTTCGATGA
 
Protein sequence
MSKRERRTFN AEFKLQVVQM IREQGLSVGD VCRDMKLGET AVRRWLAQAD EEAAGRPGIG 
KPLTAEQQRI RQLEAENKQL RGDVDILKKA SAFFARELR