| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0777 |
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| Symbol | |
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| ID | 6163977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 839830 |
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| End bp | 841107 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641663528 |
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| Product | integrase family protein |
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| Protein accession | YP_001789815 |
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| Protein GI | 171057466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000000241017 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATCT CACAACTGGA GATCGCCATG GACTTGATCC ACTCAATGCA CCCGTTGGCC
AGGGCTTGGC TGCTCGACGG CCCGCTGTCC TCGTTCGTTG ATGCATTCCA GGCGTTGCTG
GAGCGAGGTC GGTATGCCGA AGGCAGCTCA GTGGCGGCCT TGCGTGGCTG GTCGCACTTT
GCCCACTGGA TGACGAAGTG CCAGCTGTCG GCCGAGCAGA TCGACGAGGC CCTCGTCGGG
CAGTTCCTGG ATTCGCATCT GCCGCGCTGC GACTGCCATC CCGCAGCGCT GCGCACACGC
GGCGACGTGA GCGCCAGTCT CGGGCATTTG CTGGCCTTGC TGCGGGAGCA GCATGTCATC
GTGGAGTTGC CTGGGCCGAG CGGTCCCGTG GCGGAGGAAC TGACCCGCTA CAACGTCCAT
ATGCGCGACG CCCGGGGGCT GGCGATTGGC ACCCGAGGGG ATCGGCTCGC GTGCATCAGT
CTGCTGTTGC AATGCAAAGT CGCGGGCAAG GCCATCGCCA TCGGCGCGTT GCAGCCGGAA
GACGTTCGCG GCTTCATGGC AACCGAGCTC ACGCGGGTCA GCAGCGCGTC GCATGCCAGC
GCGGTCACGG CGGCGCTGCG CGCCTACTTC CGATACCGAG GGACCTGCGG TGACGCAGTG
AATGGCCTGC TCGGCGCCAT CTCTTCGCCG GTGCGATGGA GCCAGGCGTC GTTGCCGCGT
GCGCTGACGG CCGAGGAAGT CCAGCGGCTC GAAGCGCATT GCGCACAAGC CAAGCGGGCC
CCGCTGCGGC TGCTGGCCAT GGTGCGCCTG GCCTTGGATC TCGGACTGCG CGTGGGCGAG
ATCGCCAAGC TTGAGATCAC CGACTTCGAC TGGCGCGCCG GCACGGTGAC CCTGAAGAGA
ACGAAGTCCC AGCGCCAGGA TGTGCTGCCG CTGCCGGCGG TCACCGGGCA AGCGCTGTCG
GAGTACATGA GGCACGAGCG GCCTGCAACC ACGCTGCCGT CGCTGTTCGT CCGTCGGGTG
GCACCACATG ACAGACCCAT CGGCGTCGAC ACAGTGAGCC AAGCAATCGG GCGCGCCCTG
CGAGGTGCCG GCATCTCACG CAGTTGCCAC TCGTTGCGCC ACACGCTGGC CTGTCGCCTG
GTCAACAGCG GCAGTTCGAT CAAGGAGGTT GCCGATGTGC TTCGGCATCG ATCGCTGGAC
ACCTCGCTGA TCTATGCCAA GCTCGACCTG CAACTGCTTG CCGAGGTCGC TCTGCCTTGG
CCTGGGAGCG CATCATGA
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| Protein sequence | MAISQLEIAM DLIHSMHPLA RAWLLDGPLS SFVDAFQALL ERGRYAEGSS VAALRGWSHF
AHWMTKCQLS AEQIDEALVG QFLDSHLPRC DCHPAALRTR GDVSASLGHL LALLREQHVI
VELPGPSGPV AEELTRYNVH MRDARGLAIG TRGDRLACIS LLLQCKVAGK AIAIGALQPE
DVRGFMATEL TRVSSASHAS AVTAALRAYF RYRGTCGDAV NGLLGAISSP VRWSQASLPR
ALTAEEVQRL EAHCAQAKRA PLRLLAMVRL ALDLGLRVGE IAKLEITDFD WRAGTVTLKR
TKSQRQDVLP LPAVTGQALS EYMRHERPAT TLPSLFVRRV APHDRPIGVD TVSQAIGRAL
RGAGISRSCH SLRHTLACRL VNSGSSIKEV ADVLRHRSLD TSLIYAKLDL QLLAEVALPW
PGSAS
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