| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0776 |
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| Symbol | |
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| ID | 6163976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 838832 |
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| End bp | 839833 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663527 |
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| Product | integrase family protein |
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| Protein accession | YP_001789814 |
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| Protein GI | 171057465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000000202923 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCG CGTCGTCGGC GAGCATCGAC CTCACCGCCA AGGTCGAGCA ATACCTGGCT
GAACGCCGGC GCCTCGGGTT CAAGCCGTGC TCTTCCGATC TCGCCGTGCG CCATTTCACC
CGCTTCATGG CCAGCGAGGA TCAGCGCGGC GCGTTGACGG TGGACGTGAT GGTCCGGTGG
GCGCGCCAAG TGCAGCCCCG GTATCTCGTG GACGGCCAGG CCAATGTCGA CACCGCAGCG
CGCCGACTGG CAACGCTGCG CCCCTTCATG CGTTGGCTGC AGCAGTTCGA TCCGACCGTC
GAAGTGCCGG ACGACTCCAG CTTCGGCCCG ATCCCGCGCC GCGTGGCGCC GCATATCTAC
AGCGAAGCCG AGATCGCTGC GCTAATCGTC GCGGCTCGCC GACTCGGTCC TTCGGATGGC
CTTCGTGCCG CCACCTACGC GACGCTGTTC GGCCTGATCG CATCGGCCGG ACTTCGAGTC
TCCGAAGCGA TCAACCTGGC CGACTCGGAT GCGGATCTGG AGGGCCGTGT CCTGACCATC
CAGCAGACCA AGTTTGGCAA GTCGCGCATG GTGCCACTGC ACCCCAGCGT GATTGGCCCG
CTGGCCGCCT ACCGAGCCCT GCGCCGCCAG CACGTGCAAC CGAGGCCACA GATGACTTTC
TTCGTCGGCT CGCGCGGCGT GCGCCGCGGC AAGCCGTTGG GAGACCGGCA GGTGCATCGG
ATGTTCTGCC AGCTTCGCGA GCAGTTGGGC TGGATCGACC GCGGCGGCCA TGGCCGACCC
CGGGTGCATG ACCTGCGCCA CAGCTTCGCC GTGAGGCGGA TGATCCTGTG GCACCAGCAG
GGAGCGAACC TCGACCAACG CATGCTGGCC CTGTCCACGT ACATGGGCCA CATCAACATC
TCCAGCACCT ACTGGTACCT GAGCGGCGTG CCGGAGTTGA TGGCGCTGGC CGGGGCTCGA
TTCGAACGCT TCGCCGATAT CGCGGAGAGC GACGATGAGT AG
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| Protein sequence | MSAASSASID LTAKVEQYLA ERRRLGFKPC SSDLAVRHFT RFMASEDQRG ALTVDVMVRW
ARQVQPRYLV DGQANVDTAA RRLATLRPFM RWLQQFDPTV EVPDDSSFGP IPRRVAPHIY
SEAEIAALIV AARRLGPSDG LRAATYATLF GLIASAGLRV SEAINLADSD ADLEGRVLTI
QQTKFGKSRM VPLHPSVIGP LAAYRALRRQ HVQPRPQMTF FVGSRGVRRG KPLGDRQVHR
MFCQLREQLG WIDRGGHGRP RVHDLRHSFA VRRMILWHQQ GANLDQRMLA LSTYMGHINI
SSTYWYLSGV PELMALAGAR FERFADIAES DDE
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