Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_0774 |
Symbol | |
ID | 6163974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 836683 |
End bp | 837174 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641663525 |
Product | transposase |
Protein accession | YP_001789812 |
Protein GI | 171057463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00000000109552 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACAC TTCTTCTGTC GCCCATGAAG GGGCCTGGAG GTGTAGTCAT GCGCCAGACG GAACTGCATT TGTCCGAAGA GGATCGCGCG GTGATCAGCA GCATCCGAAC GAAGGGACTG CATCAAACGC GCGAAGTGAA TCGAGCCCAT GTCTTGGCCA GTCTGGATCA AGGCGTGCCG GAGGCACAGA TCATGGCTGT GCTCGGGATT GGGCGTACCG CTGTGTGGCG CACTCGTGCT GCGTATTTGC AGGGTGGAGT CGATCTGGCC TTGTTCGACG TTGCACGATC AGGGCGACCA CCCCAGTACG ACACCGATGC CCAAGCTCGG GTTACAGCGC TGGCGTGCAC GGCCCCGCCA GAGGGACGCC AGCGCTGGAC ACTGGTGGAA CTCGAACGTG CCGCACGCCA GGAGCAAGGC CTGGGCAACG TGAGTCGAGA AACCGTGCGG CGCATGCTCA AAAAAACGAC CTCAAGCCCT GGCGCAGGCT GA
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Protein sequence | MNTLLLSPMK GPGGVVMRQT ELHLSEEDRA VISSIRTKGL HQTREVNRAH VLASLDQGVP EAQIMAVLGI GRTAVWRTRA AYLQGGVDLA LFDVARSGRP PQYDTDAQAR VTALACTAPP EGRQRWTLVE LERAARQEQG LGNVSRETVR RMLKKTTSSP GAG
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