Gene Lcho_0773 details

Gene Information

• Locus tag: Lcho_0773
• ID: 6163690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: -
• Start bp: 836012
• End bp: 836683
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641663524
• Product: transposase
• Protein accession: YP_001789811
• Protein GI: 171057462

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.00000000122901
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGTGGTGCA TTGGCGCGTT GACCGACGAA TACCGCCAGC GGATGTACGC CCTGCTCGAA 
CTGTATGCAC GGCCACTGCG CTTGTCTGAA CCGGTCATCT GCATCGACGA GAAGAGCTTG 
CAGCTCATCG CTCACAGTCG TCAACCACTG CCGATGGTCG AACACAGCCC GACCAAGCAG 
GACTACGAGT ACGTACGCAA CGGCACGACC AACCTGTTCG TGGCCGTCGA GCCCAAGGCG 
GGCCGCCGAA TCGTCGAGGT CACAGCGCAG CGGGGCAAGA TCGACTTCGT TGCCTTTGTT 
AGAGATCTGC TGACCAATGC CTATGCCAAG GCACGCCGCG TTCACTTGGT GCTGGACAAC 
CTCAACACCC ACTTCCGCAA GTCGTTCGAC GATGTCATGG GCAAGCGCGC GGCGGCCAAG 
CTCCTGCGTC GAGTCCAATT CCACTACACG CCCAAGCATG CGAGTTGGCT GAACATGGCG 
GAAATCGAAA TCGGCATTCT CAGCCGGCAG TGCCTGGATC GACGGATCGC CAGTCGGGAG 
TTGTTGCAGT CCGAGGTGGA TGCCTGGCAA GAGGCCCGAA ACGCCGACGT GCGAACCATC 
GAATGGAAGG TCACTCGTCA AGACGCTGAT CAAAAACTTG GTCGTCACTA TGTTTCGACA 
CTTGCGTGTT GA 

 

Protein sequence

MWCIGALTDE YRQRMYALLE LYARPLRLSE PVICIDEKSL QLIAHSRQPL PMVEHSPTKQ 
DYEYVRNGTT NLFVAVEPKA GRRIVEVTAQ RGKIDFVAFV RDLLTNAYAK ARRVHLVLDN 
LNTHFRKSFD DVMGKRAAAK LLRRVQFHYT PKHASWLNMA EIEIGILSRQ CLDRRIASRE 
LLQSEVDAWQ EARNADVRTI EWKVTRQDAD QKLGRHYVST LAC