Gene Lcho_0771 details

Gene Information

• Locus tag: Lcho_0771
• ID: 6163688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Leptothrix cholodnii SP-6
• Kingdom: Bacteria
• Replicon accession: NC_010524
• Strand: +
• Start bp: 831851
• End bp: 832639
• Gene Length: 789 bp
• Protein Length: 262 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641663522
• Product: hypothetical protein
• Protein accession: YP_001789809
• Protein GI: 171057460

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.0000000261253
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCCGATTC TACTAACGCC GATCGTCCAT AAGTCTCTGC TACATGGATA CACCTGGGCG 
GTAACGGACG AGCAGCTTCT GGCGGAACTC ATCGCCCGCG TAGCGCTCGG GCAGGCACGC 
CACGTGAACA AGATACTGCT CAATATTGGA ACCGCCCTTC CGGTCCCAGT CGATGACGCT 
TGGGCTGCTG CGGCGAAGAT GCTGACGGTT CCCGTAGGCA CAGAGCCCTG GCATCGGGAC 
GGGTGGATGT TTCAGGTCAT GTCTTGGCTG TCGGCGCACA AGGCGGGATC AAAATCGCTG 
ATCAACACTC CGCAAATGAT CTTTGCGCAA AAGGGTTTCG ACGGGATTCA ACTGGATTTC 
GATCCAGTAG GTGCCATAAG TGCCGTGGTC ATATTTGAAG ACAAGGCAAC CGACAATCCT 
CGCAAAACGA TTCGCGACGA GGTGTGGCCG GAATTCGAGG AATACGAAAG CGGGGGTGAC 
GCCAATGTGT TGGTGGCTGA AGTCACTGGG CTGCTGGAGA AGCGGCAAGG CATCGATGTG 
GACGACGTGG TTCGCCGGGT AATTTGGAAG GATGCACGCC ATTTCAGAGT CAGCATCACC 
GTGGGCAAAC TCCATGCGAC AAACGCAGGC CGTGGGCGCC TCTTCAAGGA CTACGACACG 
AAGGTCCAAG GCAACGTCAA GCGCAGGCGT GGCGAGACGT TTTATGTTGA TGATCTGCGC 
AGCTGGATGG ACAGCATTGC GAGCAAGGTC TTGGCACACA TCGCAGCGTT GAAAGCAGCA 
CATGTTTGA 

 

Protein sequence

MPILLTPIVH KSLLHGYTWA VTDEQLLAEL IARVALGQAR HVNKILLNIG TALPVPVDDA 
WAAAAKMLTV PVGTEPWHRD GWMFQVMSWL SAHKAGSKSL INTPQMIFAQ KGFDGIQLDF 
DPVGAISAVV IFEDKATDNP RKTIRDEVWP EFEEYESGGD ANVLVAEVTG LLEKRQGIDV 
DDVVRRVIWK DARHFRVSIT VGKLHATNAG RGRLFKDYDT KVQGNVKRRR GETFYVDDLR 
SWMDSIASKV LAHIAALKAA HV