| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0770 |
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| Symbol | |
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| ID | 6163687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 830105 |
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| End bp | 831358 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663521 |
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| Product | integrase family protein |
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| Protein accession | YP_001789808 |
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| Protein GI | 171057459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000130395 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATACCG CTCAGCACTC GCGCGTCATC GAGGTCGATT GGCTCGCCGC CAGTCCCATC
GGGCCTCACG CCGTCGCGTT CAAGCATCAC CTGACCGAGC GCAGGTACGC CGCGCACACC
GTTTCCAGCT ACATCGCTGA GGTGACGCAC TTTGCGCGCT GGGTCTGCAC CCGGCGGCTG
CCGCTGGCCA GGATCGACGA AGTCTCGGTC GCCATCTTCC TTGACGACCA CCTGCCGAGT
TGCGCTTGCA CTGGACACAC GCGGCACGAC CGGGCCGATC ACAGCGCGGC GCTTGGGCAC
CTGCTCGCCG TGCTTCGCGC GCAAGGTGCC ATTGCACAGC CACCAGTCAG CACGACGCCC
GTGGATGAGG AATTGCGTCG CTACGACGAT CACATGAATC ACGTGCGTGG GCTCGCACCG
AAGAGCCGGA CCATGGTGCT GAGGATCGTT GGGCGGCTGC TGGCGGAGCG CTTCGGTGGC
CACGCCGTCG ATATCAAGGC CATCACGCCC GAGCACGTTC GGCGCTTCTT TGCCGAGCAG
GCCGCGCTGC ACAGCAAGCC TGCCGGCGCG GGGTCTGTCG TGTCATCGCT GCGCGGCTAC
TTCCGCTACC GCGCCTCGCT GGGAGATCTG GTCCACGGGT TGATCGGCGC GCTGGCCTAC
CCAGCCAACT GGGCCCTGTC TTCGCTGCCC AAGAAGTTGA CCGACGAAGA AGTCGCCCAG
TTGGTCGGCT CGCTCAACAA CCCCTGCCGT GCCATGCGGC GGGCGTGCGC CATCGTGCGC
TGCGCCCTCG ATCTCGGGCT TCGCAGCATT GAAGTCGCCC AGCTCAGCCT GGACGACATC
GACTGGCATG CCGGCACGAT CACGCTGCGC CACACCAAGG GCCGCCGTGT CGACATCCTG
CCGCTGCCTG TGGCCACCGG CGAGGCCATC GCCCGGTACC TGGAACTGGA GCGCCCCAAG
ACAACCAACC GCGCCATCTT CGTGCGCAAT GTGGCCCCGC GCGACGCGCC CATCGGCGCG
GACCTCATCC GCATCACCAT CCGCCAGGCC TACGCGCGCG CCGGACTGCC GTACACCCGT
TCGCACCTGC TGCGTCACAC GATGGCTAAC CGCTTGCTCG CCAGCGGGTC GACATTGAAG
GAAGTGGCCG ACGTGCTGCG CCACCGGTCG CTGAACACCA CGATGATCTA CGCCAAGTTG
GACAGCCGCA GTCTTGCTGC GGTGGCGCTG CCGTGGCCTG GGAGTGCGTC ATGA
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| Protein sequence | MDTAQHSRVI EVDWLAASPI GPHAVAFKHH LTERRYAAHT VSSYIAEVTH FARWVCTRRL
PLARIDEVSV AIFLDDHLPS CACTGHTRHD RADHSAALGH LLAVLRAQGA IAQPPVSTTP
VDEELRRYDD HMNHVRGLAP KSRTMVLRIV GRLLAERFGG HAVDIKAITP EHVRRFFAEQ
AALHSKPAGA GSVVSSLRGY FRYRASLGDL VHGLIGALAY PANWALSSLP KKLTDEEVAQ
LVGSLNNPCR AMRRACAIVR CALDLGLRSI EVAQLSLDDI DWHAGTITLR HTKGRRVDIL
PLPVATGEAI ARYLELERPK TTNRAIFVRN VAPRDAPIGA DLIRITIRQA YARAGLPYTR
SHLLRHTMAN RLLASGSTLK EVADVLRHRS LNTTMIYAKL DSRSLAAVAL PWPGSAS
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