| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0769 |
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| Symbol | |
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| ID | 6163686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 829128 |
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| End bp | 830108 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641663520 |
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| Product | integrase family protein |
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| Protein accession | YP_001789807 |
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| Protein GI | 171057458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000000875329 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGCCG CCGCCATGCC CTTCAAGTCG CGTGTCGAGC GCTTCTTGGT CGAGCGCCAT
GGTCTGGGGT TCTCAGCGCG CGTAGAGGCT TGCACCTTGC GCAGCTTTGC CCGCCATCTT
CATGAGATTG GGCATTGCGG ACCATTGACG GTCGAGGTGA TGACCGACTG GGCACGGCGC
GACAGCCATG GCAGCACGGA CCCGGTCACG TGGGCGCGAC GCCTGAAGAG GCTGCGCACG
TTTGTGCGCT GGCTGCAGCA GTTCGAGCCC GACACCGAAG TTCCCGATGA CACGGTCTTC
GGGCGCATGC CGGAGCGCAA GGCGCCCCAC ATCTACAGCG AGCAAGAGAT CATTGACCTG
CTGACCAGCG CCAGGCGGCT TGGACCGGCG TCCAGCCTTC GTGGTGTCGT CTTCGAGACG
CTGTTCGGGC TGATCGCCTC GACCGGCCTG CGGATCAGCG AAGCGCTGTC GCTGAAGAAC
GCTGACGTCG ATCTCAAGAC CGGCATGCTG AGCATCCAGC TGACCAAGTT CGGCAAGTCG
CGCCAAGTGC CGGTGCATCC CAGCACCCTT GAGGCGTTGC GTCAATATCG CCTGCGGCGC
GACTTGGCGG GCGAGTCTTA CGGCGACGAC ACCGCGTTCT TCGTCGGCAG CCGGGGTCGA
CTGCATGGCC GGCCTCTGGG CGACCGCCAG GTGCATCGCG TCTTCGGTGA GTTGCGCCGG
CAATTGGGTT GGCCCAATCG CGGATCGCAC CACGCCGCAC GCATCCATGA TCTGAGGCAC
ACCTTCGTCG TTCGACGCAT CGTGCAGTGG TACGCCCAGG GCGTGGATAT CGACCAGGCC
ATGCTCTCGT TGTCGACATA CATCGGGCAT GCGATGGTGA CCAACACCTA CTGGTACCTC
TCGGCGGTGC CGGAACTGAT GGCGCTGGCC GCAGGGCGGT TCGAAGCGTA CATGTCACAA
GCGGGGGCAG GCGATGAATA A
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| Protein sequence | MSAAAMPFKS RVERFLVERH GLGFSARVEA CTLRSFARHL HEIGHCGPLT VEVMTDWARR
DSHGSTDPVT WARRLKRLRT FVRWLQQFEP DTEVPDDTVF GRMPERKAPH IYSEQEIIDL
LTSARRLGPA SSLRGVVFET LFGLIASTGL RISEALSLKN ADVDLKTGML SIQLTKFGKS
RQVPVHPSTL EALRQYRLRR DLAGESYGDD TAFFVGSRGR LHGRPLGDRQ VHRVFGELRR
QLGWPNRGSH HAARIHDLRH TFVVRRIVQW YAQGVDIDQA MLSLSTYIGH AMVTNTYWYL
SAVPELMALA AGRFEAYMSQ AGAGDE
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