| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0768 |
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| Symbol | |
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| ID | 6163685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 828122 |
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| End bp | 829135 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641663519 |
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| Product | integrase family protein |
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| Protein accession | YP_001789806 |
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| Protein GI | 171057457 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000101801 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATAAGC CACCCACTCC GCCGCCGCCG TCATTCCCGG CGCTGGTCCA GCAGTTCTTC
ACCGAGTACC TGGTTGCGCA GCGGGCGGTC AGTCCGCGCA CGGTGGCTTG CTACCGAGAC
GCGCTGTCAT TGTTCCTGGG CTTCGCCAGC CACAAGCTGG GCAAGGCGCC GACGGCGATG
CAGCTTGCCG ACATACGACC CGAACTGATC CTGGCATTCC TCGACCATCT GGAGCAGGGA
CGCAAGAACA CGGTTCGCAG TCGCAACTTG CGGCTCACGG CGCTGCGAGC GTTCTTGAAG
TTCGCAGCTC GGCGTGATGT CACTGCGCTG CACGACATCG AGCGAGCGCT GGCGGTGCCG
ATGAAGCGCT TCGAGCGGCC GATGCTGGGC TTCCTGACAC GCCCAGAGAT GCTGGCAGTG
CTCGGGCAAC CGGGCGAGAA CTGGTCGTCG CAGCGAGACC ACCTGCTGCT GGCCATGCTC
TACAACACCG GCGCGCGGGT CTCCGAGATG ATCGGCGTGC GCGTCGTTGA TGTCATTCTG
GACGGTGGCG CCTGCGTGCA CCTGCACGGC AAGGGCCGCA AGTTGCGATC GATCCCGCTG
TGGAAATCCA CGGTGGTTGA GATACGCGCC TGGCTTCGGT TGAATCCGGT GTTGCGTGGC
GAGGCTGCCT TGCTGCCGAA CCGAGATGGG CAGGCCATGT GCAGATCGAA CGTCACGCAG
CGCTTGAGCC TTGCGGTGAC CCGCGCCACG GCGGAGCAGC CCAGCCTGGC CACCAAGCGC
GTCTCGCCGC ACACGCTCAG ACACACGAGC GCCATGCATC TGTTGCAGTC GGGCGTGCCG
TTCAACGTGA TCGCCCTGTG GCTCGGCCAC GAGAGCACGA CAACGACCCA CCGATATGTC
GAGGCCGACC TGGCGATGAA GGAGAAGGCG CTCGCTCGGC TGGAGGCGCC AGACACCAAG
ATGGGCCGCT ACAAGGCGCC GGACTCGCTG CTGCGGTTCC TGCAAACACT GTAA
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| Protein sequence | MNKPPTPPPP SFPALVQQFF TEYLVAQRAV SPRTVACYRD ALSLFLGFAS HKLGKAPTAM
QLADIRPELI LAFLDHLEQG RKNTVRSRNL RLTALRAFLK FAARRDVTAL HDIERALAVP
MKRFERPMLG FLTRPEMLAV LGQPGENWSS QRDHLLLAML YNTGARVSEM IGVRVVDVIL
DGGACVHLHG KGRKLRSIPL WKSTVVEIRA WLRLNPVLRG EAALLPNRDG QAMCRSNVTQ
RLSLAVTRAT AEQPSLATKR VSPHTLRHTS AMHLLQSGVP FNVIALWLGH ESTTTTHRYV
EADLAMKEKA LARLEAPDTK MGRYKAPDSL LRFLQTL
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