Gene Lcho_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0762 
Symbol 
ID6163031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp819368 
End bp820093 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content67% 
IMG OID641663512 
ProductABC transporter-related protein 
Protein accessionYP_001789800 
Protein GI171057451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000000284565 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGAAC AAGACAAGCA GGTGCTGCTG CGCATCAGTG GCCTGAAGGT CGCGTACGGT 
GGCATCCAGG CCGTCAAGGG CGTGACCCTG GAGGTTCGTG AGGGCGAGCT GGTGAGCCTG
ATCGGTGCCA ACGGCGCCGG CAAGACCACC ACGCTCAAGG CCGTCACCGG CATCCAGCCG
ATCGCCGATG GCGACGTGCA ATACCTCGGC AAGAGCCTCA AGGGGCAGGG CGCCTGGGAC
CTGGCCAAGC AGGGCCTGGT GATGATCCCG GAAGGCCGCG GTACCTTCAC GCGCATGACC
ATCACCGAGA ACCTGCAGAT GGGCGCCTAC ACGCGCAACG ACCGCGAAAT CGATGACGAC
ATCGAGAAGG TGTTCGGCAT CTTCCCGCGC CTGAAGGAGC GCCGCGCGCA GCTGGCCGGC
ACGATGTCGG GCGGCGAGCA GCAGATGCTG GCGATGGGCC GCGCCCTGAT GGCGCGCCCC
AAGGTGCTGC TGCTCGACGA GCCGTCGATG GGCCTGTCGC CGATCATGGT CGACAAGATC
TTCGAGGTCG TCGCCGACAT CCACAAGCAG GGCGTGACGA TGCTGCTGGT CGAACAGAAC
GCCAGCCGGG CGCTGGCGAT CGCCGACCGC GGCTACGTGA TGGAGTCGGG CGAGGTGACG
ATGACCGGCA ACGGTCGGGC GCTGCTGGAT GACCCGAAGG TGCGGGCGGC GTATCTGGGC
GAGTGA
 
Protein sequence
MAEQDKQVLL RISGLKVAYG GIQAVKGVTL EVREGELVSL IGANGAGKTT TLKAVTGIQP 
IADGDVQYLG KSLKGQGAWD LAKQGLVMIP EGRGTFTRMT ITENLQMGAY TRNDREIDDD
IEKVFGIFPR LKERRAQLAG TMSGGEQQML AMGRALMARP KVLLLDEPSM GLSPIMVDKI
FEVVADIHKQ GVTMLLVEQN ASRALAIADR GYVMESGEVT MTGNGRALLD DPKVRAAYLG
E