| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0762 |
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| Symbol | |
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| ID | 6163031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 819368 |
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| End bp | 820093 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663512 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001789800 |
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| Protein GI | 171057451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000284565 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAGAAC AAGACAAGCA GGTGCTGCTG CGCATCAGTG GCCTGAAGGT CGCGTACGGT
GGCATCCAGG CCGTCAAGGG CGTGACCCTG GAGGTTCGTG AGGGCGAGCT GGTGAGCCTG
ATCGGTGCCA ACGGCGCCGG CAAGACCACC ACGCTCAAGG CCGTCACCGG CATCCAGCCG
ATCGCCGATG GCGACGTGCA ATACCTCGGC AAGAGCCTCA AGGGGCAGGG CGCCTGGGAC
CTGGCCAAGC AGGGCCTGGT GATGATCCCG GAAGGCCGCG GTACCTTCAC GCGCATGACC
ATCACCGAGA ACCTGCAGAT GGGCGCCTAC ACGCGCAACG ACCGCGAAAT CGATGACGAC
ATCGAGAAGG TGTTCGGCAT CTTCCCGCGC CTGAAGGAGC GCCGCGCGCA GCTGGCCGGC
ACGATGTCGG GCGGCGAGCA GCAGATGCTG GCGATGGGCC GCGCCCTGAT GGCGCGCCCC
AAGGTGCTGC TGCTCGACGA GCCGTCGATG GGCCTGTCGC CGATCATGGT CGACAAGATC
TTCGAGGTCG TCGCCGACAT CCACAAGCAG GGCGTGACGA TGCTGCTGGT CGAACAGAAC
GCCAGCCGGG CGCTGGCGAT CGCCGACCGC GGCTACGTGA TGGAGTCGGG CGAGGTGACG
ATGACCGGCA ACGGTCGGGC GCTGCTGGAT GACCCGAAGG TGCGGGCGGC GTATCTGGGC
GAGTGA
|
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| Protein sequence | MAEQDKQVLL RISGLKVAYG GIQAVKGVTL EVREGELVSL IGANGAGKTT TLKAVTGIQP
IADGDVQYLG KSLKGQGAWD LAKQGLVMIP EGRGTFTRMT ITENLQMGAY TRNDREIDDD
IEKVFGIFPR LKERRAQLAG TMSGGEQQML AMGRALMARP KVLLLDEPSM GLSPIMVDKI
FEVVADIHKQ GVTMLLVEQN ASRALAIADR GYVMESGEVT MTGNGRALLD DPKVRAAYLG
E
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