| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_0760 |
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| Symbol | |
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| ID | 6163029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 817481 |
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| End bp | 818566 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641663510 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001789798 |
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| Protein GI | 171057449 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00000323795 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATCCGA AGAACCGACT GATCGTCATC CTGCTGGCCG CCATCGCGCT GGTCGCGCTG
CCGCTGTTCG CGGCCCAGTT CGGCCAGGGC TGGGTGCGCA TCATGGCGCT GGCGCTGCTG
TACGTGCTGC TGGCGCTGGG CCTGAACATC GTGGTGGGCT ACGCCGGCCT GCTCGACCTG
GGCTATGTGG CCTTCTACGC GCTGGGCGCC TACATGTACG CGCTGGTGGC GTCGCCGCAC
CTGAGCCTCA ACTTCGAATC GGTGCGTGCG GCCTTCCCGA CCGGCATGCA TTACCCGATC
TGGCTCGTGA TCCCCGCGGC GGCCTGCGTC GCCGCGGTGG CCGGCATGGT GCTGGGTGCG
CCGACGCTCA AGCTGCGCGG CGACTACCTG GCGATCGTCA CGCTGGGTTT CGGCGAAATC
ATCCGCGTGT TCATGAACAA CCTCGAGCAC CCGGTCAACA TCACCAACGG GCCGCGCGGC
ATCAGCCAGA TCGACTCGAT GAACCTGTTC GGCTTCAGCT TCGGCAAGCC CTACGACCTG
TTCGGTTTCG TCATCCCGTC GGTGGCGCTG TACTACTACC TGTTCCTGGT GCTGGTGGTG
GGCAGCGTGG TGATCTGCCA CAACCTCGAG AACTCGCGCA TCGGCCGTGC CTGGATGGCG
ATCCGCGAGG ACGAGACCGC CGCCAAGGCG ATGGGCCTGA ACACCCGCAA CCTCAAGCTG
CTGGCGTTCG GCATGGGCGC CACCTTCGGC GGTGTGTCGG GCTCGATGTT CGCGGCCTTC
CAGGGCTTCA TCTCGCCCGA GTCGTTCACG CTGATGGAGT CGGTGATGAT CGTCGCGATG
GTCGTGCTGG GTGGCATCGG CCACATCCCC GGCGTGATCC TGGGTGCGCT GCTGCTGGCG
GCCCTGCCCG AGGTGCTGCG CTACGTGGCC GGCGACGTGC AGTCGATGAC CGGCGGGCGG
CTCGACGCCG CCATCCTGCG CCAGCTGCTG ATCGCCTCGG CCATGATCGT GATCATGCTG
TTGCGCCCGC GCGGCCTGTG GCCTTCGCCC GAGCATGGCA AGGCGGCCCC CGTGGCCGTG
AAATGA
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| Protein sequence | MNPKNRLIVI LLAAIALVAL PLFAAQFGQG WVRIMALALL YVLLALGLNI VVGYAGLLDL
GYVAFYALGA YMYALVASPH LSLNFESVRA AFPTGMHYPI WLVIPAAACV AAVAGMVLGA
PTLKLRGDYL AIVTLGFGEI IRVFMNNLEH PVNITNGPRG ISQIDSMNLF GFSFGKPYDL
FGFVIPSVAL YYYLFLVLVV GSVVICHNLE NSRIGRAWMA IREDETAAKA MGLNTRNLKL
LAFGMGATFG GVSGSMFAAF QGFISPESFT LMESVMIVAM VVLGGIGHIP GVILGALLLA
ALPEVLRYVA GDVQSMTGGR LDAAILRQLL IASAMIVIML LRPRGLWPSP EHGKAAPVAV
K
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