Gene Lcho_0756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_0756 
Symbol 
ID6161270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp811791 
End bp814202 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content70% 
IMG OID641663506 
Productcell divisionFtsK/SpoIIIE 
Protein accessionYP_001789794 
Protein GI171057445 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0143018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTATC CGCTCGGTTC GCTGCGCTCG GCGGCTTCCG CTGAAGCTGC CGGCGCCCCC 
ACTCCCCCGT TGCCTGCCCG ACCGGTTCCG CGCTGGAAGC TGCAGATCGG CATCGCCCTG
GGCGCGACGA TCTGGCTGCT GTGGCTGATG GCCCTGCTCA GCCACCACCC TGGTGACTGG
GCGTTCTCGA CCTCCGGCGA TGGCGAGCCG CTGCGCAACC GCGTGGGCGC GCTCGGCGCG
TGGTGGTCCG ACCTGTCCTA CGTGACGCTG GGCCTGTCGG TCTGGTGGTG CCTGCTGTTC
ATGCTGCGTG GCTGGCTGGC GCTGGTGGCG CAGTCGTTGC GCCTGGACAG CCCGTCCGAC
CCGGAGGGCG CCATGGTCTG GCGGCCGCAG TGGCTGGCCT GGCTCGGTCT GCTGCTGCTG
CTGATGGCCA GCTGTGCACT CGAGTGGACC CGCCTCTACC GGTTCGAGGC CGGCCTTGCG
GGCTCCCACG CGGGCGGCAT GCTGGGCGCC ACGCTGGGGC CGGTGAGCAT GAAGTGGCTC
GGGTTCGCGG GCAGCGGTGT CGCCTGGATC GTCGTGCTGC TGATCGGGCT GTCGTGGGCG
TTCCGCTTCT CGTGGGTGGT GATGGCCGAG CGCATCGGCG CCGCCGTCGA AGGCCTGCGC
GAGCGCCGCG TCGAGCGCCT CGAGCGCGCC GAGGACGAGC GCATCGGCCA GCGCGCCCAG
CGCGAACGCG AACGCGGGGT CGAGGTCGAG CGGGTGGCCG AGGCCGAGCG CCACATCGCC
GAGCATCAGC TGCCGGTGCT GGTCGAGCTG CCGACGCTGA CCGAGACCGC GCTCGCACCG
GGCCTGCCCG CCGCACCGGC GATGCCGGCG GCGCCTGCCG TGACGGAGCG CCAGAAACCG
CTGTTCGTCG AGCTCGAGAA CACCCGGCTG CCGCAGGTCG ACCTGCTCGA TGCGGCACCC
GCGACCCGGG TCGAGACCGT CACGCCCGAG TCGATCGAGA TGACCAGCCG GCTGATCGAG
AAGAAGCTCA AGGACTTCGG CGTCGAGGTG CGGGTGGTGA TGGCCCAGCC CGGCCCGGTG
ATCACGCGCT ACGAGATCGA GCCGGCGGTG GGCGTGAAGG GCTCGCAGGT CGTCAACCTG
GCCAAGGACC TGGCGCGCTC GCTGAGCCTG GTGTCGATCC GCGTGGTCGA GATCATCCCC
GGCAAGACGA CGATGGCGCT CGAACTGCCC AACGCGCGGC GCCTGACGAT CCGCCTGGCC
GAGATCCTCG GCTCGCAGGT CTACGACGAC GCCACCTCGC AGCTCACGAT CGGCCTGGGC
AAGGACATCG TCGGCGCACC GGTCGTCGCC GACCTGGCCA AGATGCCGCA CGTGCTGGTG
GCCGGCACCA CCGGTTCGGG CAAGTCGGTG GGCATCAACG CGATGATCCT GAGCCTGCTC
TACAAGGCCG AGGCGCGCGA CGTGCGGCTG ATCCTGATCG ACCCGAAGAT GCTCGAGATG
AGCGTCTACG AAGGCATCCC GCACCTGCTG GCTCCCGTCG TCACCGACAT GAAGCAGGCC
GGCAACGCGC TCAACTGGTG CGTGGCCGAG ATGGAGCGGC GCTACAAGCT GCTCAGCAAG
ATGGGCGTGC GCAACCTCGC CGGCTACAAC AAGAAGATCG CCGAGGCCAC CGCGCACGGC
GAGCTGATCC CGAACCCCTT CAGCCTGACG CCCGAGGCCC CCGAGCCGCT CGACCGCCTG
CCGCAGATCG TGGTCGTGAT CGACGAGCTG GCCGACCTGA TGATGGTGGT CGGCAAGAAG
ATCGAGGAGC TGATCGCGCG CCTGGCGCAG AAGGCGCGTG CCTCGGGCAT CCACCTGATC
CTGGCGACGC AGCGGCCCAG CGTGGACGTC ATCACCGGCC TGATCAAGGC CAACATCCCG
ACGCGGATCT CGTTCCAGGT CAGCAGCAAG ATCGACAGCC GCACCATCCT CGACCAGATG
GGCGCCGAGG CGCTGCTCGG CCAGGGCGAC ATGCTGTATC TGTCGCCCGG CACCGGCCTG
CCGGTGCGCG TGCACGGCGC CTTCGTCAGC GACGACGAGG TGCACCGCGT CGTCAGCTAC
CTCAAGACCC AGGGCGAGCC CAACTACATC GAAGGCATCC TCGAAGGCGG CGTGCTCGAC
GGCGAAGGTG GCGATGGCGC CGAAGGCGGA GCCGGCGCCG CCGGCGGCGA GGCCGACCCG
ATGTACGACC AGGCCGTGGC CGTGGTGCTG CAGCATCGTC GGGCCTCGAT CTCGCTGGTG
CAGCGCCACC TGCGCATCGG CTACAACCGT GCCGCGCGCC TGCTCGAGCA GATGGAGCAG
TCCGGCCTGG TCTCGAGCAT GGCCACCAAC GGCAACCGCG ACATCCTCGT GCCGCCACGC
CCCACCGAAT GA
 
Protein sequence
MTYPLGSLRS AASAEAAGAP TPPLPARPVP RWKLQIGIAL GATIWLLWLM ALLSHHPGDW 
AFSTSGDGEP LRNRVGALGA WWSDLSYVTL GLSVWWCLLF MLRGWLALVA QSLRLDSPSD
PEGAMVWRPQ WLAWLGLLLL LMASCALEWT RLYRFEAGLA GSHAGGMLGA TLGPVSMKWL
GFAGSGVAWI VVLLIGLSWA FRFSWVVMAE RIGAAVEGLR ERRVERLERA EDERIGQRAQ
RERERGVEVE RVAEAERHIA EHQLPVLVEL PTLTETALAP GLPAAPAMPA APAVTERQKP
LFVELENTRL PQVDLLDAAP ATRVETVTPE SIEMTSRLIE KKLKDFGVEV RVVMAQPGPV
ITRYEIEPAV GVKGSQVVNL AKDLARSLSL VSIRVVEIIP GKTTMALELP NARRLTIRLA
EILGSQVYDD ATSQLTIGLG KDIVGAPVVA DLAKMPHVLV AGTTGSGKSV GINAMILSLL
YKAEARDVRL ILIDPKMLEM SVYEGIPHLL APVVTDMKQA GNALNWCVAE MERRYKLLSK
MGVRNLAGYN KKIAEATAHG ELIPNPFSLT PEAPEPLDRL PQIVVVIDEL ADLMMVVGKK
IEELIARLAQ KARASGIHLI LATQRPSVDV ITGLIKANIP TRISFQVSSK IDSRTILDQM
GAEALLGQGD MLYLSPGTGL PVRVHGAFVS DDEVHRVVSY LKTQGEPNYI EGILEGGVLD
GEGGDGAEGG AGAAGGEADP MYDQAVAVVL QHRRASISLV QRHLRIGYNR AARLLEQMEQ
SGLVSSMATN GNRDILVPPR PTE